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  • TISSUE

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  • ATF3
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:8.1 nTPM
GTEx:21.7 nTPM
FANTOM5:14.6 Scaled Tags Per Million
Pig:0.5 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.1
Sample id Sample description nTPM
Putamen
nTPM: 8.1
2482 Female, age 94, left hemisphere 10.4
2489 Female, age 72, unknown 9.0
1829 Male, age 74, unknown 8.3
1937 Female, age 91, right hemisphere 8.3
2647 Male, age 75, left hemisphere 7.5
2466 Female, age 79, unknown 6.9
1838 Male, age 80, right hemisphere 6.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 21.7
Samples: 254

Max nTPM: 248.3
Min nTPM: 3.5
Std nTPM: 31.1
Median nTPM: 12.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 248.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 204.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 187.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 153.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 148.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 121.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 111.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 111.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 109.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 106.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 103.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 96.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 89.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 78.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 69.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 65.9
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 60.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 59.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 55.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 52.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 51.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 50.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 48.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 47.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 39.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 36.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 36.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 35.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 32.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 31.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 31.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 30.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 29.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 29.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 29.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 29.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 27.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 27.0
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 26.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 26.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 26.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 25.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 25.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 25.0
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 24.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 24.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 24.1
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 23.6
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 23.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 23.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 23.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 21.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 21.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 21.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 21.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 20.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 20.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 20.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 20.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 20.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 19.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 19.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 19.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 19.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 19.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 19.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 19.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 19.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 18.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 18.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 18.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 18.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 18.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 18.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 17.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 17.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 17.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 17.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 16.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 16.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 16.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 16.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 16.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 16.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 16.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 16.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 15.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 15.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 15.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 15.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 15.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 15.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 15.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 15.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 15.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 15.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 15.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 15.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 14.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 14.6
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 14.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 14.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 14.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 14.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 14.3
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 14.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 14.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 14.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 13.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 13.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 13.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 13.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 13.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 13.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 13.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 13.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 13.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 13.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 13.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 13.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 12.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 12.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 12.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 12.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 12.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 12.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 12.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 12.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 12.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 12.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 12.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 12.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 12.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 12.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 12.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 12.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 12.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 12.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 12.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 12.0
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 12.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 11.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 11.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 11.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 11.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 11.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 11.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 11.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 11.0
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 10.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 10.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 10.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 10.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 10.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 10.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 10.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 10.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 10.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 10.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 10.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 10.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 10.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 10.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 10.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 10.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 9.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 9.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 9.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 9.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 9.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 9.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 9.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 9.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 9.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 9.5
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 9.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 9.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 9.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 9.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 9.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 9.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 9.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 8.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 8.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 8.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 8.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 8.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 8.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 8.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 8.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 8.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 8.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 8.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 8.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 8.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 8.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 8.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 8.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 8.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 8.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 7.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 7.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 7.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 7.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 7.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 7.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 7.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 7.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 7.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 7.5
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 7.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 7.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 7.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 7.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 7.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 7.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 7.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 7.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 7.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 7.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 7.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 6.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 6.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 6.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 6.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 6.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 6.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 6.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 6.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 6.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 6.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 6.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 6.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 6.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 5.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 5.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 5.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 5.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 5.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 5.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 5.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 5.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 5.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 4.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 4.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 4.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 4.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 4.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 4.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 4.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 4.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 4.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 3.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 3.5
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

14.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 14.6
FF:10176-103C5 60 years, female 14.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.5
Pig sample Sample description nTPM
Putamen
nTPM: 0.5
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.2
Sample A Female 1.1
Sample B Female 0.2
Sample C Male 0.4
Sample D Male 0.4

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