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TSC22D3
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  • TSC22D3
TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Not detected
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:338.8 nTPM
HPA:193.0 nTPM
GTEx:338.8 nTPM
FANTOM5:251.5 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody CAB034364
Follicle cells Not detected
Ovarian stroma cells Medium



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

193.0
overview
Female, age 64
Ovary sample 192
nTPM: 100.6
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 252.5
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 246.1
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 102.4
N/A
Female, age 16
Ovary sample 3663
nTPM: 218.3
N/A
Female, age 20
Ovary sample 3664
nTPM: 150.2
N/A
Female, age 32
Ovary sample 3665
nTPM: 281.1

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

338.8
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 338.8
Samples: 193

Max nTPM: 1221.5
Min nTPM: 70.4
Std nTPM: 238.1
Median nTPM: 287.9
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 1221.5
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 1129.9
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 1054.2
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 1019.7
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 1015.2
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 985.6
GTEX-145ME-1226-SM-5MR87 40-49 years, female 980.4
GTEX-18D9A-0826-SM-718C1 30-39 years, female 963.7
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 941.4
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 924.3
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 886.2
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 802.6
GTEX-S341-0726-SM-4AD5R 40-49 years, female 789.9
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 779.9
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 758.0
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 701.4
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 664.0
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 658.2
GTEX-14PKV-1226-SM-6871T 20-29 years, female 631.7
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 631.3
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 622.0
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 611.1
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 607.2
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 601.2
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 588.7
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 584.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 577.2
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 574.0
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 551.8
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 548.1
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 540.3
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 523.4
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 522.8
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 520.2
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 504.1
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 503.9
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 501.4
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 486.0
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 479.8
GTEX-QCQG-1426-SM-48U22 50-59 years, female 468.4
GTEX-R55G-1526-SM-48FER 40-49 years, female 464.0
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 456.0
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 455.1
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 450.8
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 442.7
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 442.4
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 442.1
GTEX-15EOM-1526-SM-68723 20-29 years, female 441.7
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 434.1
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 433.8
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 430.0
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 429.6
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 427.7
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 427.1
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 426.5
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 425.4
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 424.7
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 423.3
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 419.5
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 418.9
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 417.8
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 411.5
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 400.3
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 398.8
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 393.4
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 391.8
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 389.2
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 386.2
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 384.5
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 375.7
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 373.5
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 372.2
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 366.4
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 366.0
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 360.0
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 353.8
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 353.0
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 352.8
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 345.8
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 343.1
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 342.5
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 338.6
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 337.6
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 337.1
GTEX-S32W-1226-SM-4AD67 50-59 years, female 336.8
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 334.9
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 331.2
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 330.3
GTEX-P78B-1926-SM-3P616 40-49 years, female 324.6
GTEX-11I78-1926-SM-59878 50-59 years, female 310.9
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 309.2
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 307.7
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 307.1
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 306.2
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 303.0
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 291.4
GTEX-R45C-2526-SM-GRR28 60-69 years, female 287.9
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 281.6
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 266.1
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 264.5
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 260.0
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 259.4
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 253.8
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 241.7
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 240.4
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 237.9
GTEX-QVJO-3126-SM-COH22 60-69 years, female 237.9
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 236.1
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 236.0
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 234.7
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 234.4
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 233.8
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 230.5
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 229.2
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 228.9
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 224.4
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 223.4
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 222.4
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 219.6
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 218.8
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 218.5
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 208.1
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 203.6
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 203.5
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 199.0
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 197.7
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 197.4
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 196.1
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 192.7
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 190.5
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 190.1
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 189.7
GTEX-14JG6-0626-SM-68716 30-39 years, female 184.2
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 183.1
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 181.2
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 178.7
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 178.5
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 173.3
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 167.1
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 163.8
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 163.8
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 162.0
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 161.1
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 156.9
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 151.8
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 149.1
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 147.8
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 144.1
GTEX-183WM-1926-SM-72D5F 70-79 years, female 142.5
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 141.1
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 141.0
GTEX-RU72-2226-SM-46MUE 50-59 years, female 132.3
GTEX-13SLX-2426-SM-664OM 50-59 years, female 126.2
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 126.1
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 123.5
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 121.9
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 121.1
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 120.6
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 120.5
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 115.1
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 112.7
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 111.7
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 110.9
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 110.2
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 110.2
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 108.6
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 108.3
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 107.5
GTEX-14BIN-1426-SM-664NI 50-59 years, female 107.0
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 105.6
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 104.7
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 104.5
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 102.2
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 101.4
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 100.1
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 99.1
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 97.2
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 96.8
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 96.3
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 94.4
GTEX-Q734-0726-SM-48TZP 40-49 years, female 92.7
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 90.7
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 88.8
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 87.1
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 85.3
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 84.9
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 82.6
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 80.9
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 78.4
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 78.1
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 75.2
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 74.8
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 70.4
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

251.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 251.5
FF:10020-101D2 47,75,84 years, female 251.5

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