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ACSS1
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  • TISSUE

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  • ACSS1
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:51.6 nTPM
GTEx:56.7 nTPM
FANTOM5:68.9 Scaled Tags Per Million
Pig:12.2 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.6
Sample id Sample description nTPM
Putamen
nTPM: 51.6
2647 Male, age 75, left hemisphere 76.6
2489 Female, age 72, unknown 66.0
2482 Female, age 94, left hemisphere 53.2
2466 Female, age 79, unknown 47.8
1829 Male, age 74, unknown 45.9
1937 Female, age 91, right hemisphere 38.6
1838 Male, age 80, right hemisphere 33.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 56.7
Samples: 254

Max nTPM: 163.3
Min nTPM: 7.6
Std nTPM: 27.9
Median nTPM: 52.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 163.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 147.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 138.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 136.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 128.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 121.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 120.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 120.3
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 119.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 116.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 113.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 112.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 110.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 109.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 102.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 101.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 100.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 97.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 96.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 96.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 95.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 94.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 94.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 93.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 91.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 91.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 90.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 90.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 89.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 89.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 89.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 89.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 88.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 88.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 88.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 88.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 87.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 87.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 87.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 85.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 85.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 85.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 85.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 85.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 84.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 84.9
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 83.8
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 82.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 81.5
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 80.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 79.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 79.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 78.9
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 78.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 77.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 77.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 77.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 76.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 76.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 76.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 76.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 76.3
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 76.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 75.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 75.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 75.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 73.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 73.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 72.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 71.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 71.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 71.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 69.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 69.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 68.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 67.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 67.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 67.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 67.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 67.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 66.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 66.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 65.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 65.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 64.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 64.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 64.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 63.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 63.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 63.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 63.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 63.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 62.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 62.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 62.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 61.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 60.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 60.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 59.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 59.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 59.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 58.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 58.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 58.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 58.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 57.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 57.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 57.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 57.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 57.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 56.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 56.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 55.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 55.7
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 55.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 54.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 54.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 54.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 54.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 53.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 53.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 53.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 53.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 52.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 52.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 52.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 52.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 52.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 52.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 51.8
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 51.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 51.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 50.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 50.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 50.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 50.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 50.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 49.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 49.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 49.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 49.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 48.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 48.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 48.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 48.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 48.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 47.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 47.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 46.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 46.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 46.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 46.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 46.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 45.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 45.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 44.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 44.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 44.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 44.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 44.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 43.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 42.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 42.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 41.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 41.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 41.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 41.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 40.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 40.9
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 40.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 40.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 40.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 40.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 40.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 39.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 39.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 39.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 39.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 39.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 38.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 38.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 38.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 38.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 37.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 37.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 37.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 37.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 37.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 37.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 36.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 36.6
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 36.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 36.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 36.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 36.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 35.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 35.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 35.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 34.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 34.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 34.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 34.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 33.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 33.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 32.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 32.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 32.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 32.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 32.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 32.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 31.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 31.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 31.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 31.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 31.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 31.0
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 29.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 28.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 28.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 28.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 26.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 26.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 26.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 25.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 25.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 25.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 24.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 23.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 23.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 23.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 22.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 21.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 21.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 20.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 19.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 19.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 19.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 19.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 19.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 18.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 18.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 18.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 17.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 17.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 16.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 14.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 14.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 13.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 13.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 11.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 11.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 10.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 9.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 7.6
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

68.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 68.9
FF:10176-103C5 60 years, female 68.9

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.2
Pig sample Sample description nTPM
Putamen
nTPM: 12.2
Samples: 4

Max nTPM: 13.3
Min nTPM: 10.2
Sample A Female 10.2
Sample B Female 12.5
Sample C Male 12.7
Sample D Male 13.3

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