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TISSUE PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:129.8 nTPM
GTEx:21.3 nTPM
FANTOM5:97.4 Scaled Tags Per Million
Pig:79.5 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

129.8
Sample id Sample description nTPM
Putamen
nTPM: 129.8
1838 Male, age 80, right hemisphere 175.6
1937 Female, age 91, right hemisphere 165.8
1829 Male, age 74, unknown 146.9
2489 Female, age 72, unknown 133.1
2466 Female, age 79, unknown 125.5
2647 Male, age 75, left hemisphere 86.3
2482 Female, age 94, left hemisphere 75.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 21.3
Samples: 254

Max nTPM: 54.4
Min nTPM: 4.6
Std nTPM: 9.2
Median nTPM: 19.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 54.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 48.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 46.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 46.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 45.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 44.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 44.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 42.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 41.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 40.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 40.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 40.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 39.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 39.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 38.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 37.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 37.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 37.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 37.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 35.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 34.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 34.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 34.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 33.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 33.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 33.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 33.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 33.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 33.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 33.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 32.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 32.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 32.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 32.1
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 31.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 31.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 31.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 31.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 31.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 30.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 30.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 30.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 30.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 30.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 30.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 30.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 30.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 30.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 30.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 30.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 29.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 29.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 29.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 28.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 28.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 27.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 27.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 27.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 27.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 27.7
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 27.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 27.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 27.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 27.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 27.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 27.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 27.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 26.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 26.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 26.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 26.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 25.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 25.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 25.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 25.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 25.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 25.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 24.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 24.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 24.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 24.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 24.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 24.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 23.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 23.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 23.7
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 23.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 23.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 23.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 23.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 23.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 23.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 22.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 22.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 22.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 22.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 22.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 22.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 22.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 22.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 22.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 22.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 22.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 22.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 21.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 21.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 21.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 21.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 21.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 21.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 21.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 21.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 21.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 21.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 20.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 20.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 20.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 20.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 20.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 20.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 20.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 20.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 19.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 19.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 19.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 19.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 19.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 19.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 19.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 18.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 18.9
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 18.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 18.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 18.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 18.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 18.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 18.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 18.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 18.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 18.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 18.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 18.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 18.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 17.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 17.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 17.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 17.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 17.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 17.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 17.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 17.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 17.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 17.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 17.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 17.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 17.4
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 17.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 17.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 17.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 16.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 16.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 16.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 16.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 16.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 16.4
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 16.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 16.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 16.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 16.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 16.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 15.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 15.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 15.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 15.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 15.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 15.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 15.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 15.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 15.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 15.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 15.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 15.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 15.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 15.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 15.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 14.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 14.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 14.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 14.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 14.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 14.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 14.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 14.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 14.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 14.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 13.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 13.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 13.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 13.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 13.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 13.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 13.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 13.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 13.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 13.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 13.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 13.1
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 13.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 12.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 12.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 12.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 12.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 12.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 12.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 12.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 12.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 12.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 12.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 12.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 12.0
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 12.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 11.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 11.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 11.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 11.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 11.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 11.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 11.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 11.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 11.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 10.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 10.8
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 10.8
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 9.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 9.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 9.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 9.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 9.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 9.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 9.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 9.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 9.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 9.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 8.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 8.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 8.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 8.0
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 8.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 7.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 7.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 6.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 5.8
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 5.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 4.6
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

97.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 97.4
FF:10176-103C5 60 years, female 97.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.5
Pig sample Sample description nTPM
Putamen
nTPM: 79.5
Samples: 4

Max nTPM: 109.8
Min nTPM: 34.3
Sample A Female 34.3
Sample B Female 89.2
Sample C Male 109.8
Sample D Male 84.6

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