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  • APIP
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:10.4 nTPM
GTEx:13.5 nTPM
FANTOM5:26.2 Scaled Tags Per Million
Pig:12.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.4
Sample id Sample description nTPM
Putamen
nTPM: 10.4
2482 Female, age 94, left hemisphere 13.4
1937 Female, age 91, right hemisphere 11.2
1829 Male, age 74, unknown 10.9
2466 Female, age 79, unknown 10.9
2647 Male, age 75, left hemisphere 9.2
2489 Female, age 72, unknown 8.9
1838 Male, age 80, right hemisphere 8.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 13.5
Samples: 254

Max nTPM: 42.4
Min nTPM: 4.7
Std nTPM: 4.6
Median nTPM: 13.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 42.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 34.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 27.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 27.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 23.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 22.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 22.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 22.4
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 22.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 21.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 21.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 20.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 20.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 20.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 20.2
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 20.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 20.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 19.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 19.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 19.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 19.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 19.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 19.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 19.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 19.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 19.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 19.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 18.8
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 18.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 18.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 18.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 18.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 18.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 18.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 18.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 18.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 18.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 18.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 18.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 17.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 17.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 17.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 17.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 17.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 17.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 17.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 16.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 16.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 16.8
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 16.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 16.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 16.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 16.6
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 16.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 16.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 16.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 16.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 16.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 16.1
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 16.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 16.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 15.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 15.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 15.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 15.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 15.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 15.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 15.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 15.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 15.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 15.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 15.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 15.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 15.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 15.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 15.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 15.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 15.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 15.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 14.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 14.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 14.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 14.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 14.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 14.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 14.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 14.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 14.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 14.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 14.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 14.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 14.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 14.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 14.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 14.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 14.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 14.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 14.4
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 14.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 14.3
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 14.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 14.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 14.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 14.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 14.2
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 14.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 14.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 13.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 13.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 13.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 13.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 13.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 13.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 13.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 13.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 13.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 13.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 13.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 13.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 13.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 13.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 13.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 13.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 13.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 13.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 13.2
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 13.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 13.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 13.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 13.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 13.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 13.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 12.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 12.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 12.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 12.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 12.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 12.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 12.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 12.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 12.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 12.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 12.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 12.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 12.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 12.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 12.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 12.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 12.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 12.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 12.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 12.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 12.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 12.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 12.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 12.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 12.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 12.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 11.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 11.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 11.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 11.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 11.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 11.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 11.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 11.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 11.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 11.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 11.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 11.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 11.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 11.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 11.1
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 11.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 11.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 11.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 11.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 11.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 11.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 10.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 10.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 10.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 10.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 10.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 10.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 10.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 10.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 10.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 10.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 10.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 10.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 10.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 10.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 10.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 10.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 10.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 9.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 9.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 9.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 9.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 9.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 9.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 9.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 9.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 9.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 9.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 9.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 9.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 9.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 9.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 9.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 9.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 9.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 9.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 9.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 8.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 8.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 8.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 8.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 8.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 8.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 8.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 8.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 8.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 8.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 8.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 8.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 8.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 7.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 7.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 7.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 7.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 7.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 7.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 7.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 7.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 7.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 7.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 7.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 7.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 7.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 6.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 6.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 6.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 6.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 6.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 6.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 5.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 5.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 5.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 5.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 4.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 4.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

26.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 26.2
FF:10176-103C5 60 years, female 26.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.8
Pig sample Sample description nTPM
Putamen
nTPM: 12.8
Samples: 4

Max nTPM: 15.9
Min nTPM: 9.6
Sample A Female 15.9
Sample B Female 9.6
Sample C Male 13.3
Sample D Male 12.5

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