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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1733.8 nTPM
HPA:1733.8 nTPM
GTEx:1666.1 nTPM
FANTOM5:4.8 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA058373
Glandular cells Medium



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1733.8
overview
Female, age 68
Salivary gland sample 216
nTPM: 1736.8
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 1599.8
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1864.8
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1666.1
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 1666.1
Samples: 181

Max nTPM: 2871.3
Min nTPM: 894.4
Std nTPM: 291.0
Median nTPM: 1614.2
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 2871.3
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 2696.4
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 2690.0
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 2511.2
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 2390.5
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 2386.4
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 2262.0
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 2245.1
GTEX-146FR-1226-SM-5MR78 60-69 years, female 2225.9
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 2163.4
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 2159.0
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 2123.2
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 2116.1
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 2098.2
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 2029.7
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 2026.5
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 2017.4
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 2008.1
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 1999.5
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 1999.3
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 1993.9
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 1980.4
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 1974.5
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 1967.7
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 1956.7
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 1937.4
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 1919.2
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 1913.1
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 1887.1
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 1885.8
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 1877.5
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 1874.0
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 1870.2
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 1868.0
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 1854.7
GTEX-1445S-2926-SM-5O993 60-69 years, male 1853.8
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 1851.3
GTEX-15SHV-2226-SM-6M464 60-69 years, male 1847.2
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 1845.4
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 1837.5
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 1834.0
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 1830.6
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 1813.7
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 1811.3
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 1804.8
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 1796.5
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 1796.2
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 1794.1
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 1794.0
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 1790.3
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 1790.2
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 1789.5
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 1785.5
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 1783.9
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 1783.4
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 1782.5
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 1779.9
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 1764.0
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 1759.5
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 1759.4
GTEX-Y111-2626-SM-4TT24 50-59 years, male 1757.9
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 1748.6
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 1748.4
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 1744.8
GTEX-11P82-0926-SM-5986X 20-29 years, male 1742.1
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 1738.1
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 1733.7
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 1729.7
GTEX-13113-1526-SM-5EGHV 60-69 years, female 1715.7
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 1712.3
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 1711.6
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 1706.0
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 1700.1
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 1698.5
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 1697.5
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 1692.0
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 1691.5
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 1679.6
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 1668.8
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 1664.0
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 1657.8
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 1647.6
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 1643.2
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 1640.5
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 1637.3
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 1629.4
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 1625.2
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 1623.9
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 1620.3
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 1614.2
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 1614.2
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 1613.9
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 1613.1
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 1610.5
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 1609.7
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 1608.6
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 1606.7
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 1605.7
GTEX-X261-2426-SM-4PQZU 50-59 years, male 1602.8
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 1597.6
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 1585.4
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 1579.9
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 1576.9
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 1573.9
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 1565.6
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 1564.4
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 1557.0
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 1554.8
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 1554.4
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 1551.2
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 1548.7
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 1545.0
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 1544.4
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 1543.4
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 1541.7
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 1540.8
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 1539.9
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 1537.9
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 1537.4
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 1536.9
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 1533.4
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 1531.5
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 1520.1
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 1518.9
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 1515.6
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 1514.8
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 1513.2
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 1507.4
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 1503.6
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 1497.5
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 1489.9
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 1489.7
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 1488.2
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 1481.1
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 1477.1
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 1475.7
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 1471.1
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 1470.9
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 1470.1
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 1469.8
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 1450.5
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 1446.4
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 1441.4
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 1440.4
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 1439.7
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 1438.1
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 1427.6
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 1427.0
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 1426.6
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 1421.1
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 1419.7
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 1412.8
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 1406.1
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 1404.0
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 1403.7
GTEX-13O21-1926-SM-5MR39 50-59 years, male 1402.8
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 1400.6
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 1391.9
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 1386.0
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 1378.4
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 1366.4
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 1352.1
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 1344.4
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 1340.1
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 1332.7
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 1313.9
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 1307.0
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 1305.9
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 1305.2
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 1303.6
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 1300.7
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 1294.7
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 1287.3
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 1279.8
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 1274.7
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 1247.8
GTEX-1B932-0626-SM-731EM 40-49 years, female 1245.7
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 1245.5
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 1169.4
GTEX-178AV-1426-SM-6LLID 40-49 years, male 1112.7
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 894.4
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

4.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 0.9
FF:10199-103F1 23 years, male 0.9
Salivary gland
Scaled Tags Per Million: 4.8
FF:10093-102C3 16-60 years, mixed 4.8
Submaxillary gland
Scaled Tags Per Million: 2.0
FF:10202-103F4 24 years, male 2.0

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