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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1387.0
nTPM
Monaco:
1630.1
nTPM
Schmiedel:
1305.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1387.0
HPA sample
nTPM
gdT-cell nTPM: 1177.0
Samples: 6
Max nTPM: 1534.2
Min nTPM: 953.3
P10809_1007
1114.2
P10809_1022
1534.2
P10809_1041
1353.9
P10809_1060
990.0
P10809_1077
1116.2
P10809_1098
953.3
MAIT T-cell nTPM: 1151.7
Samples: 6
Max nTPM: 1350.3
Min nTPM: 993.4
P10809_1006
1202.4
P10809_1024
1350.3
P10809_1043
1138.7
P10809_1062
1118.4
P10809_1083
1106.7
P10809_1097
993.4
Memory CD4 T-cell nTPM: 1055.7
Samples: 6
Max nTPM: 1127.8
Min nTPM: 945.1
P10809_1014
1054.8
P10809_1026
1101.0
P10809_1045
1127.8
P10809_1064
1059.8
P10809_1086
1045.8
P10809_1113
945.1
Memory CD8 T-cell nTPM: 1213.2
Samples: 5
Max nTPM: 1302.3
Min nTPM: 946.5
P10809_1012
1258.5
P10809_1027
1269.7
P10809_1046
1302.3
P10809_1065
1288.8
P10809_1111
946.5
Naive CD4 T-cell nTPM: 718.8
Samples: 6
Max nTPM: 806.4
Min nTPM: 625.6
P10809_1015
706.0
P10809_1030
806.4
P10809_1049
725.3
P10809_1068
679.9
P10809_1085
769.3
P10809_1112
625.6
Naive CD8 T-cell nTPM: 920.3
Samples: 6
Max nTPM: 1170.1
Min nTPM: 662.1
P10809_1016
732.1
P10809_1031
970.9
P10809_1050
915.6
P10809_1069
1170.1
P10809_1087
1071.2
P10809_1110
662.1
T-reg nTPM: 1387.0
Samples: 6
Max nTPM: 1487.2
Min nTPM: 1321.2
P10809_1018
1397.5
P10809_1037
1383.7
P10809_1056
1321.2
P10809_1075
1387.5
P10809_1094
1345.0
P10809_1106
1487.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1630.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 987.5
Samples: 4
Max nTPM: 1135.0
Min nTPM: 639.6
RHH5202_R3573
1135.0
RHH5230_R3602
1045.9
RHH5259_R3631
639.6
RHH5288_R3660
1129.6
Effector memory CD8 T-cell nTPM: 1630.1
Samples: 4
Max nTPM: 1865.9
Min nTPM: 1223.7
RHH5203_R3574
1698.1
RHH5231_R3603
1865.9
RHH5260_R3632
1223.7
RHH5289_R3661
1732.8
MAIT T-cell nTPM: 1257.4
Samples: 4
Max nTPM: 1508.4
Min nTPM: 1024.2
RHH5233_R3605
1508.4
RHH5205_R3576
1024.2
RHH5262_R3634
1323.7
RHH5297_R3663
1173.1
Memory CD4 T-cell TFH nTPM: 1162.9
Samples: 4
Max nTPM: 1507.1
Min nTPM: 966.3
RHH5300_R3666
966.3
RHH5236_R3608
1507.1
RHH5265_R3637
1110.6
RHH5208_R3579
1067.6
Memory CD4 T-cell Th1 nTPM: 954.7
Samples: 4
Max nTPM: 1151.9
Min nTPM: 724.0
RHH5210_R3581
1001.3
RHH5302_R3668
1151.9
RHH5238_R3610
724.0
RHH5267_R3639
941.7
Memory CD4 T-cell Th1/Th17 nTPM: 1183.9
Samples: 4
Max nTPM: 1607.2
Min nTPM: 669.2
RHH5303_R3669
1607.2
RHH5211_R3582
1538.0
RHH5239_R3611
669.2
RHH5268_R3640
921.0
Memory CD4 T-cell Th17 nTPM: 1049.8
Samples: 4
Max nTPM: 1183.3
Min nTPM: 814.3
RHH5304_R3670
1121.7
RHH5212_R3583
1183.3
RHH5240_R3612
1079.9
RHH5269_R3641
814.3
Memory CD4 T-cell Th2 nTPM: 1147.2
Samples: 4
Max nTPM: 1271.5
Min nTPM: 1037.7
RHH5305_R3671
1111.6
RHH5213_R3584
1167.9
RHH5241_R3613
1271.5
RHH5270_R3642
1037.7
Naive CD4 T-cell nTPM: 801.4
Samples: 4
Max nTPM: 942.0
Min nTPM: 671.8
RHH5306_R3672
766.3
RHH5214_R3585
825.6
RHH5242_R3614
942.0
RHH5271_R3643
671.8
Naive CD8 T-cell nTPM: 702.5
Samples: 4
Max nTPM: 810.4
Min nTPM: 432.5
RHH5201_R3572
810.4
RHH5229_R3601
432.5
RHH5258_R3630
786.1
RHH5287_R3659
780.8
Non-Vd2 gdTCR nTPM: 1447.3
Samples: 4
Max nTPM: 1820.1
Min nTPM: 1051.6
RHH5235_R3607
1051.6
RHH5264_R3636
1820.1
RHH5207_R3578
1513.5
RHH5299_R3665
1403.8
T-reg nTPM: 933.3
Samples: 4
Max nTPM: 1275.6
Min nTPM: 747.4
RHH5301_R3667
956.2
RHH5237_R3609
1275.6
RHH5266_R3638
753.9
RHH5209_R3580
747.4
Terminal effector memory CD4 T-cell nTPM: 1380.7
Samples: 2
Max nTPM: 1555.5
Min nTPM: 1205.8
RHH5243_R3615
1205.8
RHH5272_R3644
1555.5
Terminal effector memory CD8 T-cell nTPM: 1556.2
Samples: 4
Max nTPM: 1774.3
Min nTPM: 1265.2
RHH5232_R3604
1774.3
RHH5204_R3575
1472.4
RHH5261_R3633
1265.2
RHH5296_R3662
1712.9
Vd2 gdTCR nTPM: 1402.6
Samples: 4
Max nTPM: 1719.2
Min nTPM: 1226.2
RHH5234_R3606
1394.2
RHH5206_R3577
1719.2
RHH5263_R3635
1270.9
RHH5298_R3664
1226.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.