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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
178.2
nTPM
GTEx:
178.2
nTPM
FANTOM5:
434.3
Scaled Tags Per Million
Mouse:
454.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
178.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 178.2
Samples: 105
Max nTPM: 269.0
Min nTPM: 131.5
Std nTPM: 26.3
Median nTPM:
495_1
57 years, female
269.0
308_1
70 years, female
236.7
162_1
79 years, female
233.3
413_1
59 years, female
228.0
491_1
89 years, female
227.7
307_1
66 years, female
221.9
126_1
63 years, male
221.3
414_1
84 years, female
218.8
2_1
77 years, female
218.0
466_1
57 years, female
215.2
490_1
67 years, female
215.2
415_1
77 years, female
214.0
315_1
62 years, female
213.5
35_1
74 years, female
213.1
17_1
71 years, male
208.1
501_1
88 years, male
206.4
4_1
88 years, female
206.2
139_1
64 years, female
205.6
384_1
83 years, male
203.6
145_1
84 years, male
203.0
142_1
61 years, female
200.6
153_1
70 years, female
199.3
81_1
67 years, male
195.9
389_1
86 years, female
195.8
41_1
94 years, female
193.7
376_1
75 years, female
193.7
316_1
62 years, male
192.9
377_1
82 years, female
192.9
189_1
76 years, male
192.8
137_1
83 years, male
192.6
89_1
63 years, male
192.1
526_1
61 years, male
192.0
322_1
76 years, male
191.7
217_1
76 years, male
190.2
120_1
70 years, female
189.3
518_1
75 years, female
188.9
447_1
81 years, male
187.2
266_1
85 years, male
186.7
117_1
61 years, male
186.0
404_1
82 years, female
185.7
246_1
77 years, male
185.0
18_1
88 years, male
181.6
218_1
71 years, female
180.9
405_1
91 years, male
180.9
42_1
85 years, male
180.2
375_1
74 years, female
180.1
468_1
89 years, male
180.1
237_1
82 years, male
179.6
6_1
73 years, female
176.6
313_1
79 years, female
176.6
321_1
62 years, female
176.6
452_1
88 years, female
174.9
499_1
55 years, female
174.7
43_1
64 years, female
174.6
311_1
78 years, male
173.7
109_1
81 years, female
173.2
320_1
89 years, female
172.7
149_1
88 years, male
172.6
319_1
81 years, male
171.9
254_1
77 years, female
169.7
288_1
66 years, female
168.8
379_1
60 years, male
168.5
173_1
67 years, male
168.2
324_1
76 years, male
167.3
386_1
76 years, male
167.2
229_1
69 years, female
167.0
32_1
67 years, male
166.2
396_1
62 years, male
165.8
348_1
84 years, male
165.7
425_1
59 years, female
165.5
243_1
75 years, male
165.2
251_1
78 years, male
163.6
394_1
75 years, female
163.0
115_1
83 years, male
162.7
119_1
70 years, female
162.6
265_1
87 years, male
162.6
335_1
73 years, female
162.5
286_1
68 years, female
162.3
406_1
79 years, male
161.7
293_1
68 years, female
161.6
503_1
68 years, male
158.4
317_1
60 years, male
157.1
291_1
76 years, male
156.2
99_1
64 years, male
155.6
517_1
88 years, male
154.4
314_1
67 years, male
153.6
352_1
62 years, male
152.5
480_1
63 years, male
152.4
347_1
72 years, male
151.3
177_1
74 years, male
150.5
9_1
66 years, female
148.3
295_1
61 years, female
148.2
349_1
83 years, male
146.9
350_1
84 years, female
146.8
172_1
72 years, female
146.0
163_1
78 years, male
141.5
292_1
71 years, male
141.5
355_1
70 years, female
139.5
354_1
81 years, female
138.9
318_1
68 years, male
138.7
506_1
65 years, male
138.7
264_1
73 years, female
136.6
353_1
82 years, female
136.2
351_1
91 years, male
133.4
356_1
87 years, female
131.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.