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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
89.8
nTPM
GTEx:
89.8
nTPM
FANTOM5:
28.3
Scaled Tags Per Million
Pig:
17.9
nTPM
Mouse:
42.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
89.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 89.8
Samples: 105
Max nTPM: 173.7
Min nTPM: 62.8
Std nTPM: 20.8
Median nTPM:
308_1
70 years, female
173.7
414_1
84 years, female
159.2
490_1
67 years, female
158.2
413_1
59 years, female
157.2
491_1
89 years, female
154.3
315_1
62 years, female
122.5
466_1
57 years, female
117.6
415_1
77 years, female
117.5
501_1
88 years, male
115.3
246_1
77 years, male
112.9
89_1
63 years, male
110.2
495_1
57 years, female
110.1
149_1
88 years, male
109.6
126_1
63 years, male
104.8
2_1
77 years, female
103.6
42_1
85 years, male
103.1
499_1
55 years, female
102.8
265_1
87 years, male
102.6
35_1
74 years, female
102.3
396_1
62 years, male
102.3
313_1
79 years, female
101.4
137_1
83 years, male
100.5
254_1
77 years, female
99.7
142_1
61 years, female
99.5
526_1
61 years, male
99.5
162_1
79 years, female
99.0
377_1
82 years, female
97.9
266_1
85 years, male
97.8
307_1
66 years, female
96.1
468_1
89 years, male
95.9
404_1
82 years, female
95.5
18_1
88 years, male
95.4
384_1
83 years, male
95.0
145_1
84 years, male
94.3
81_1
67 years, male
94.2
518_1
75 years, female
94.2
394_1
75 years, female
94.1
117_1
61 years, male
93.4
120_1
70 years, female
92.5
4_1
88 years, female
92.4
153_1
70 years, female
91.8
319_1
81 years, male
91.4
389_1
86 years, female
91.0
189_1
76 years, male
90.6
237_1
82 years, male
90.3
347_1
72 years, male
89.8
17_1
71 years, male
88.2
375_1
74 years, female
88.0
109_1
81 years, female
87.0
139_1
64 years, female
87.0
99_1
64 years, male
86.6
217_1
76 years, male
86.5
119_1
70 years, female
86.0
452_1
88 years, female
85.7
506_1
65 years, male
85.7
264_1
73 years, female
85.6
243_1
75 years, male
84.1
406_1
79 years, male
82.3
9_1
66 years, female
81.7
324_1
76 years, male
81.7
503_1
68 years, male
80.9
115_1
83 years, male
80.6
173_1
67 years, male
80.5
251_1
78 years, male
80.4
218_1
71 years, female
80.3
351_1
91 years, male
80.2
379_1
60 years, male
79.6
163_1
78 years, male
79.1
32_1
67 years, male
78.8
177_1
74 years, male
78.8
229_1
69 years, female
78.7
335_1
73 years, female
78.7
356_1
87 years, female
78.6
311_1
78 years, male
77.9
447_1
81 years, male
77.6
295_1
61 years, female
77.5
517_1
88 years, male
77.5
480_1
63 years, male
77.3
288_1
66 years, female
76.9
322_1
76 years, male
76.3
349_1
83 years, male
75.2
386_1
76 years, male
74.5
43_1
64 years, female
73.6
293_1
68 years, female
73.4
321_1
62 years, female
73.3
405_1
91 years, male
73.3
314_1
67 years, male
72.8
6_1
73 years, female
72.5
41_1
94 years, female
72.5
317_1
60 years, male
72.5
425_1
59 years, female
70.9
286_1
68 years, female
70.7
292_1
71 years, male
69.5
320_1
89 years, female
69.5
355_1
70 years, female
69.5
318_1
68 years, male
68.3
354_1
81 years, female
68.3
316_1
62 years, male
68.0
353_1
82 years, female
68.0
172_1
72 years, female
66.9
291_1
76 years, male
65.6
376_1
75 years, female
65.4
350_1
84 years, female
64.7
348_1
84 years, male
63.7
352_1
62 years, male
62.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
