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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
117.6
nTPM
Monaco:
272.1
nTPM
Schmiedel:
131.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
117.6
HPA sample
nTPM
gdT-cell nTPM: 88.9
Samples: 6
Max nTPM: 103.5
Min nTPM: 67.4
P10809_1007
67.4
P10809_1022
96.0
P10809_1041
75.1
P10809_1060
99.3
P10809_1077
92.0
P10809_1098
103.5
MAIT T-cell nTPM: 117.5
Samples: 6
Max nTPM: 142.0
Min nTPM: 93.3
P10809_1006
95.9
P10809_1024
142.0
P10809_1043
93.3
P10809_1062
115.0
P10809_1083
122.5
P10809_1097
136.5
Memory CD4 T-cell nTPM: 100.2
Samples: 6
Max nTPM: 126.9
Min nTPM: 82.2
P10809_1014
82.2
P10809_1026
89.5
P10809_1045
90.8
P10809_1064
102.4
P10809_1086
126.9
P10809_1113
109.1
Memory CD8 T-cell nTPM: 102.8
Samples: 5
Max nTPM: 128.1
Min nTPM: 76.7
P10809_1012
76.7
P10809_1027
101.6
P10809_1046
85.6
P10809_1065
128.1
P10809_1111
122.1
Naive CD4 T-cell nTPM: 117.4
Samples: 6
Max nTPM: 126.4
Min nTPM: 100.9
P10809_1015
100.9
P10809_1030
109.7
P10809_1049
123.1
P10809_1068
126.4
P10809_1085
120.3
P10809_1112
123.9
Naive CD8 T-cell nTPM: 114.6
Samples: 6
Max nTPM: 137.3
Min nTPM: 86.2
P10809_1016
91.4
P10809_1031
122.6
P10809_1050
86.2
P10809_1069
117.3
P10809_1087
137.3
P10809_1110
132.7
T-reg nTPM: 117.7
Samples: 6
Max nTPM: 141.3
Min nTPM: 79.6
P10809_1018
79.6
P10809_1037
122.3
P10809_1056
111.9
P10809_1075
112.6
P10809_1094
141.3
P10809_1106
138.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
272.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 202.8
Samples: 4
Max nTPM: 286.7
Min nTPM: 136.9
RHH5202_R3573
286.7
RHH5230_R3602
176.8
RHH5259_R3631
136.9
RHH5288_R3660
210.9
Effector memory CD8 T-cell nTPM: 268.5
Samples: 4
Max nTPM: 313.2
Min nTPM: 193.7
RHH5203_R3574
271.1
RHH5231_R3603
295.8
RHH5260_R3632
193.7
RHH5289_R3661
313.2
MAIT T-cell nTPM: 264.8
Samples: 4
Max nTPM: 294.8
Min nTPM: 229.2
RHH5233_R3605
262.2
RHH5205_R3576
229.2
RHH5262_R3634
272.9
RHH5297_R3663
294.8
Memory CD4 T-cell TFH nTPM: 252.6
Samples: 4
Max nTPM: 327.2
Min nTPM: 203.8
RHH5300_R3666
222.4
RHH5236_R3608
256.8
RHH5265_R3637
203.8
RHH5208_R3579
327.2
Memory CD4 T-cell Th1 nTPM: 191.8
Samples: 4
Max nTPM: 239.9
Min nTPM: 144.5
RHH5210_R3581
239.9
RHH5302_R3668
219.5
RHH5238_R3610
144.5
RHH5267_R3639
163.3
Memory CD4 T-cell Th1/Th17 nTPM: 212.6
Samples: 4
Max nTPM: 275.4
Min nTPM: 142.6
RHH5303_R3669
275.4
RHH5211_R3582
270.8
RHH5239_R3611
142.6
RHH5268_R3640
161.6
Memory CD4 T-cell Th17 nTPM: 195.7
Samples: 4
Max nTPM: 242.0
Min nTPM: 155.9
RHH5304_R3670
242.0
RHH5212_R3583
214.9
RHH5240_R3612
155.9
RHH5269_R3641
170.0
Memory CD4 T-cell Th2 nTPM: 249.3
Samples: 4
Max nTPM: 274.2
Min nTPM: 225.1
RHH5305_R3671
225.1
RHH5213_R3584
259.2
RHH5241_R3613
274.2
RHH5270_R3642
238.8
Naive CD4 T-cell nTPM: 253.9
Samples: 4
Max nTPM: 282.2
Min nTPM: 217.5
RHH5306_R3672
282.2
RHH5214_R3585
280.2
RHH5242_R3614
217.5
RHH5271_R3643
235.7
Naive CD8 T-cell nTPM: 257.6
Samples: 4
Max nTPM: 320.0
Min nTPM: 157.6
RHH5201_R3572
320.0
RHH5229_R3601
157.6
RHH5258_R3630
264.6
RHH5287_R3659
288.3
Non-Vd2 gdTCR nTPM: 238.8
Samples: 4
Max nTPM: 272.1
Min nTPM: 195.3
RHH5235_R3607
195.3
RHH5264_R3636
262.3
RHH5207_R3578
272.1
RHH5299_R3665
225.4
T-reg nTPM: 249.2
Samples: 4
Max nTPM: 313.1
Min nTPM: 225.8
RHH5301_R3667
226.0
RHH5237_R3609
313.1
RHH5266_R3638
225.8
RHH5209_R3580
231.9
Terminal effector memory CD4 T-cell nTPM: 272.1
Samples: 2
Max nTPM: 315.5
Min nTPM: 228.7
RHH5243_R3615
228.7
RHH5272_R3644
315.5
Terminal effector memory CD8 T-cell nTPM: 239.8
Samples: 4
Max nTPM: 286.4
Min nTPM: 171.4
RHH5232_R3604
258.9
RHH5204_R3575
242.6
RHH5261_R3633
171.4
RHH5296_R3662
286.4
Vd2 gdTCR nTPM: 224.3
Samples: 4
Max nTPM: 235.0
Min nTPM: 213.3
RHH5234_R3606
213.3
RHH5206_R3577
235.0
RHH5263_R3635
214.3
RHH5298_R3664
234.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.