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TPM3
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  • TISSUE

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  • TPM3
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:106.1 nTPM
GTEx:116.1 nTPM
FANTOM5:105.2 Scaled Tags Per Million
Pig:175.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.1
Sample id Sample description nTPM
Putamen
nTPM: 106.1
1829 Male, age 74, unknown 123.6
2466 Female, age 79, unknown 120.9
1838 Male, age 80, right hemisphere 109.6
2489 Female, age 72, unknown 101.9
1937 Female, age 91, right hemisphere 98.7
2482 Female, age 94, left hemisphere 96.9
2647 Male, age 75, left hemisphere 90.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 116.1
Samples: 254

Max nTPM: 200.6
Min nTPM: 66.0
Std nTPM: 24.1
Median nTPM: 113.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 200.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 195.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 186.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 177.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 175.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 171.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 169.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 168.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 164.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 162.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 158.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 156.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 155.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 154.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 154.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 153.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 153.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 152.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 152.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 152.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 151.7
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 151.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 151.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 150.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 150.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 149.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 149.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 149.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 148.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 148.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 146.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 145.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 144.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 143.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 143.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 142.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 141.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 141.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 140.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 140.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 140.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 140.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 140.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 139.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 139.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 139.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 138.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 138.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 138.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 136.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 136.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 136.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 135.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 135.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 135.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 134.9
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 134.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 134.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 134.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 134.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 133.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 133.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 133.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 133.2
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 132.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 132.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 132.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 131.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 131.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 130.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 130.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 129.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 128.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 127.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 127.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 127.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 126.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 126.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 126.1
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 126.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 126.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 125.5
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 125.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 125.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 124.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 124.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 123.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 123.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 123.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 122.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 122.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 122.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 122.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 122.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 121.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 121.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 121.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 121.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 120.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 120.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 118.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 118.7
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 118.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 118.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 118.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 118.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 118.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 117.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 117.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 117.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 117.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 116.7
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 116.3
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 116.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 116.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 116.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 115.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 115.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 115.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 114.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 114.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 114.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 113.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 113.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 113.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 113.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 113.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 113.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 112.8
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 112.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 112.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 111.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 111.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 110.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 110.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 110.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 110.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 110.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 110.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 110.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 110.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 109.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 108.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 108.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 108.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 108.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 108.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 107.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 107.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 107.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 107.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 106.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 106.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 106.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 106.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 106.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 106.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 106.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 106.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 106.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 105.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 105.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 105.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 105.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 104.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 104.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 104.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 103.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 103.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 103.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 103.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 103.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 102.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 102.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 102.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 102.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 101.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 101.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 101.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 101.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 101.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 100.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 100.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 100.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 100.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 100.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 98.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 98.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 98.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 97.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 97.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 97.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 97.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 97.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 97.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 97.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 97.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 96.9
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 96.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 96.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 96.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 96.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 96.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 95.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 94.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 94.6
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 94.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 94.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 94.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 93.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 93.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 92.6
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 92.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 92.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 92.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 91.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 91.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 91.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 91.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 90.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 90.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 89.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 88.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 88.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 88.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 88.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 87.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 87.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 87.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 86.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 86.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 86.3
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 84.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 84.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 84.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 82.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 82.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 82.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 82.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 82.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 81.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 81.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 80.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 80.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 80.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 77.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 77.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 77.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 76.4
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 74.0
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 73.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 72.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 71.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 66.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

105.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 105.2
FF:10176-103C5 60 years, female 105.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

175.3
Pig sample Sample description nTPM
Putamen
nTPM: 175.3
Samples: 4

Max nTPM: 229.7
Min nTPM: 133.4
Sample A Female 133.4
Sample B Female 158.9
Sample C Male 229.7
Sample D Male 179.2

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