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  • TISSUE

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TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:7.5 nTPM
GTEx:14.0 nTPM
FANTOM5:15.7 Scaled Tags Per Million
Pig:17.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.5
Sample id Sample description nTPM
Putamen
nTPM: 7.5
2466 Female, age 79, unknown 9.4
2647 Male, age 75, left hemisphere 8.8
1937 Female, age 91, right hemisphere 8.0
2482 Female, age 94, left hemisphere 7.9
1829 Male, age 74, unknown 6.6
1838 Male, age 80, right hemisphere 6.2
2489 Female, age 72, unknown 5.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.0
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 14.0
Samples: 254

Max nTPM: 33.1
Min nTPM: 5.2
Std nTPM: 3.9
Median nTPM: 13.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 33.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 31.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 27.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 25.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 25.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 24.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 22.9
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 22.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 21.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 20.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 20.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 20.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 20.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 20.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 20.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 20.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 20.2
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 20.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 20.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 19.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 19.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 19.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 19.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 19.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 18.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 18.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 18.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 18.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 18.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 18.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 18.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 18.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 18.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 18.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 17.7
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 17.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 17.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 17.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 17.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 17.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 17.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 17.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 17.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 17.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 17.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 17.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 17.1
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 17.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 16.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 16.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 16.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 16.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 16.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 16.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 16.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 16.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 16.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 15.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 15.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 15.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 15.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 15.7
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 15.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 15.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 15.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 15.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 15.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 15.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 15.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 15.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 15.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 15.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 15.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 15.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 15.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 15.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 15.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 15.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 15.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 15.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 15.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 15.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 14.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 14.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 14.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 14.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 14.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 14.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 14.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 14.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 14.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 14.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 14.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 14.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 14.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 14.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 14.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 14.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 14.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 14.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 14.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 14.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 14.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 14.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 14.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 14.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 14.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 14.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 14.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 14.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 14.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 14.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 14.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 13.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 13.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 13.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 13.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 13.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 13.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 13.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 13.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 13.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 13.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 13.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 13.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 13.5
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 13.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 13.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 13.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 13.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 13.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 13.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 13.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 13.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 13.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 13.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 13.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 13.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 13.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 13.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 13.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 13.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 13.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 13.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 13.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 12.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 12.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 12.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 12.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 12.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 12.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 12.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 12.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 12.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 12.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 12.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 12.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 12.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 12.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 12.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 12.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 12.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 12.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 12.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 12.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 12.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 12.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 12.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 12.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 12.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 12.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 12.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 12.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 12.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 12.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 12.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 12.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 12.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 11.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 11.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 11.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 11.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 11.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 11.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 11.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 11.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 11.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 11.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 11.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 11.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 11.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 11.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 11.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 11.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 11.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 11.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 11.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 11.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 11.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 11.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 10.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 10.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 10.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 10.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 10.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 10.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 10.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 10.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 10.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 10.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 10.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 10.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 10.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 10.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 10.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 10.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 10.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 10.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 10.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 10.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 10.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 9.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 9.8
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 9.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 9.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 9.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 9.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 9.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 9.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 9.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 9.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 9.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 9.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 9.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 9.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 9.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 9.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 9.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 9.0
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 8.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 8.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 8.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 8.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 8.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 8.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 8.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 8.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 8.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 8.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 6.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 6.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 6.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 6.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 5.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

15.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 15.7
FF:10176-103C5 60 years, female 15.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.1
Pig sample Sample description nTPM
Putamen
nTPM: 17.2
Samples: 4

Max nTPM: 25.0
Min nTPM: 12.6
Sample A Female 25.0
Sample B Female 12.6
Sample C Male 14.0
Sample D Male 17.0

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