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TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:61.4 nTPM
GTEx:61.0 nTPM
FANTOM5:65.1 Scaled Tags Per Million
Pig:24.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.4
Sample id Sample description nTPM
Putamen
nTPM: 61.4
2482 Female, age 94, left hemisphere 75.3
2489 Female, age 72, unknown 67.4
2647 Male, age 75, left hemisphere 61.9
2466 Female, age 79, unknown 58.9
1937 Female, age 91, right hemisphere 56.2
1829 Male, age 74, unknown 55.7
1838 Male, age 80, right hemisphere 54.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.0
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 61.0
Samples: 254

Max nTPM: 116.2
Min nTPM: 25.6
Std nTPM: 14.8
Median nTPM: 59.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 116.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 103.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 102.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 101.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 97.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 97.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 95.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 93.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 90.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 90.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 89.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 86.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 86.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 85.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 85.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 84.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 83.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 83.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 81.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 81.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 80.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 80.7
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 80.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 80.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 80.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 80.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 79.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 79.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 79.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 78.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 78.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 77.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 77.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 76.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 75.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 75.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 75.7
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 75.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 75.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 75.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 75.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 75.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 74.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 74.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 74.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 74.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 74.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 73.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 72.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 72.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 72.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 71.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 71.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 71.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 71.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 71.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 70.9
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 70.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 70.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 70.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 70.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 69.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 69.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 69.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 69.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 69.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 68.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 68.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 68.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 68.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 68.4
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 68.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 68.3
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 68.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 67.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 67.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 67.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 67.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 67.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 67.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 67.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 66.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 66.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 66.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 66.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 66.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 66.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 65.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 65.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 65.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 65.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 65.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 65.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 64.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 64.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 64.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 64.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 64.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 64.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 64.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 64.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 64.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 64.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 63.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 63.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 63.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 63.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 63.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 63.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 62.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 62.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 62.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 62.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 62.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 62.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 62.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 62.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 61.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 61.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 61.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 61.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 60.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 60.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 60.7
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 60.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 60.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 59.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 59.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 59.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 59.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 59.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 59.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 59.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 59.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 59.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 59.2
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 59.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 59.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 59.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 58.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 58.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 58.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 58.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 58.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 58.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 57.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 57.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 57.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 57.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 57.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 57.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 56.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 56.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 56.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 56.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 56.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 56.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 55.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 55.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 55.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 55.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 55.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 55.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 54.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 54.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 54.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 54.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 54.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 54.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 54.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 54.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 54.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 53.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 53.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 53.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 53.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 53.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 52.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 52.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 52.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 52.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 52.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 52.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 52.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 52.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 52.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 52.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 51.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 51.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 51.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 51.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 51.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 51.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 50.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 50.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 50.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 50.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 49.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 49.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 49.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 49.5
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 49.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 49.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 49.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 48.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 48.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 47.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 47.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 47.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 47.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 47.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 47.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 46.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 46.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 45.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 45.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 45.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 45.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 45.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 45.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 45.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 44.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 44.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 44.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 43.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 43.3
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 43.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 43.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 42.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 42.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 42.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 42.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 41.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 41.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 41.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 41.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 40.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 39.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 39.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 38.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 38.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 37.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 37.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 36.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 36.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 34.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 34.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 33.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 32.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 31.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 28.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 27.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 26.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 25.6
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

65.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 65.1
FF:10176-103C5 60 years, female 65.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.9
Pig sample Sample description nTPM
Putamen
nTPM: 24.9
Samples: 4

Max nTPM: 27.9
Min nTPM: 20.2
Sample A Female 26.9
Sample B Female 20.2
Sample C Male 27.9
Sample D Male 24.4

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