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  • TISSUE

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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:193.5 nTPM
HPA Brain:281.2 nTPM
GTEx:193.5 nTPM
Pig:88.7 nTPM
Mouse:268.5 nTPM
Allen mouse:12.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

281.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 263.6
1961 Female, age 42, unknown 268.6
2226 Male, age 75, left hemisphere 258.6
Dorsomedial nucleus
nTPM: 205.1
2041 Female, age 72, unknown 232.6
1989 Male, age 62, unknown 205.1
2017 Female, age 42, unknown 177.6
Lateral hypothalamic area
nTPM: 281.2
1791 Male, age 80, right hemisphere 336.8
2271 Male, age 75, both hemispheres 285.1
2412 Male, age 62, unknown 270.2
2228 Male, age 66, unknown 232.7
Mammillary body
nTPM: 187.4
2413 Male, age 66, unknown 202.9
1948 Female, age 72, unknown 197.7
1834 Female, age 42, unknown 182.8
1945 Male, age 80, right hemisphere 181.4
1923 Female, age 72, unknown 172.4
Paraventricular nucleus
nTPM: 224.3
2700 Male, age 62, unknown 224.3
Preoptic area
nTPM: 210.3
2414 Female, age 72, unknown 213.7
1907 Male, age 80, right hemisphere 211.7
1861 Female, age 42, unknown 205.7
Supraoptic nucleus
nTPM: 238.6
2835 Female, age 72, unknown 308.4
2043 Male, age 62, unknown 227.1
1894 Female, age 72, unknown 180.4
Ventromedial nucleus
nTPM: 256.1
1982 Female, age 72, unknown 272.2
1822 Female, age 42, unknown 240.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

193.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 193.5
Samples: 257

Max nTPM: 322.9
Min nTPM: 101.8
Std nTPM: 43.0
Median nTPM: 187.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 322.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 321.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 320.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 314.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 312.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 304.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 304.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 302.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 296.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 294.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 293.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 290.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 290.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 279.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 278.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 272.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 271.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 264.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 264.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 261.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 260.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 259.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 257.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 254.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 251.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 250.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 247.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 245.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 245.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 242.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 241.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 240.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 238.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 238.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 236.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 236.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 235.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 233.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 233.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 232.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 231.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 231.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 230.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 229.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 229.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 228.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 228.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 227.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 227.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 225.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 225.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 225.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 222.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 220.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 220.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 219.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 219.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 218.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 218.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 218.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 218.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 218.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 217.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 217.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 216.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 215.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 214.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 213.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 213.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 212.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 212.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 212.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 212.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 211.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 210.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 210.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 209.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 208.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 208.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 208.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 207.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 207.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 207.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 207.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 207.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 206.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 205.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 205.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 204.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 204.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 203.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 203.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 202.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 202.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 202.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 201.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 201.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 201.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 201.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 201.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 200.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 200.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 200.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 199.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 198.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 198.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 198.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 197.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 197.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 196.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 196.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 195.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 195.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 195.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 193.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 193.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 193.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 192.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 192.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 192.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 190.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 189.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 189.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 189.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 188.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 188.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 187.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 187.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 187.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 187.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 186.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 185.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 185.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 185.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 185.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 184.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 184.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 184.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 183.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 183.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 183.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 183.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 182.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 182.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 182.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 182.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 181.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 181.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 181.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 181.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 180.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 180.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 180.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 178.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 178.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 178.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 177.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 177.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 177.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 177.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 176.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 176.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 176.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 174.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 174.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 174.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 173.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 173.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 172.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 172.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 171.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 171.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 171.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 171.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 170.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 170.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 169.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 168.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 168.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 168.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 167.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 167.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 167.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 167.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 166.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 166.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 166.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 165.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 164.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 164.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 164.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 164.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 164.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 163.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 163.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 162.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 161.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 159.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 159.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 158.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 158.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 157.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 157.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 156.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 156.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 156.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 155.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 154.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 154.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 154.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 154.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 153.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 153.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 153.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 153.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 153.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 152.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 152.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 152.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 151.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 149.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 148.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 147.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 147.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 146.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 146.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 145.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 145.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 144.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 143.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 141.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 141.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 141.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 141.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 140.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 140.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 138.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 138.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 137.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 136.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 136.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 135.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 135.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 134.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 134.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 134.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 134.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 134.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 132.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 131.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 127.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 125.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 125.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 124.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 122.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 108.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 101.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 88.8
Samples: 4

Max nTPM: 114.8
Min nTPM: 65.6
Sample A Female 114.8
Sample B Female 91.4
Sample C Male 83.2
Sample D Male 65.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

268.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 268.5
Samples: 4

Max nTPM: 273.8
Min nTPM: 263.9
Sample A Male 265.0
Sample B Male 273.8
Sample C Female 263.9
Sample D Female 271.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 12.9
75774677 Antisense, RP_060530_01_D02, Mouse strain C57BL/6J (56 days, male) 17.6
633678 Antisense, RP_040907_02_A10, Mouse strain C57BL/6J (56 days, male) 8.1

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