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TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:10.7 nTPM
GTEx:50.5 nTPM
FANTOM5:4.6 Scaled Tags Per Million
Pig:28.2 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.7
Sample id Sample description nTPM
Putamen
nTPM: 10.7
2482 Female, age 94, left hemisphere 20.7
2466 Female, age 79, unknown 12.7
2647 Male, age 75, left hemisphere 12.2
1937 Female, age 91, right hemisphere 10.1
1829 Male, age 74, unknown 7.7
1838 Male, age 80, right hemisphere 6.6
2489 Female, age 72, unknown 5.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 50.5
Samples: 254

Max nTPM: 97.7
Min nTPM: 19.0
Std nTPM: 12.6
Median nTPM: 49.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 97.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 91.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 91.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 84.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 83.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 83.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 82.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 78.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 76.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 75.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 75.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 74.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 73.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 73.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 70.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 70.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 69.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 67.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 67.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 67.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 66.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 65.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 65.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 65.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 65.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 65.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 64.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 64.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 64.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 64.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 64.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 64.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 64.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 64.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 64.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 63.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 63.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 63.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 63.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 63.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 63.4
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 63.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 62.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 62.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 62.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 61.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 61.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 61.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 61.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 61.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 61.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 61.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 60.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 60.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 60.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 59.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 58.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 58.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 58.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 58.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 57.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 57.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 57.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 57.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 57.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 57.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 57.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 57.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 56.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 56.7
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 56.6
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 56.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 56.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 56.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 55.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 55.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 55.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 55.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 55.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 55.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 55.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 55.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 55.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 55.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 55.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 54.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 54.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 54.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 54.4
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 54.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 54.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 54.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 54.1
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 54.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 53.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 53.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 53.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 53.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 53.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 53.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 53.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 52.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 52.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 52.4
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 51.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 51.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 51.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 51.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 51.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 51.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 51.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 51.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 51.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 50.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 50.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 50.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 50.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 50.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 50.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 50.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 50.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 50.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 49.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 49.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 49.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 49.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 49.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 49.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 49.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 49.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 49.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 49.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 49.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 49.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 48.9
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 48.9
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 48.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 48.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 48.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 48.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 48.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 48.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 48.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 48.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 48.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 47.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 46.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 46.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 46.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 46.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 46.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 46.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 46.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 45.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 45.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 45.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 45.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 45.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 45.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 45.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 45.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 45.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 45.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 45.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 44.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 44.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 44.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 44.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 44.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 44.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 44.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 44.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 44.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 44.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 44.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 44.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 43.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 43.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 43.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 43.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 43.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 43.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 43.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 43.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 42.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 42.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 42.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 42.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 42.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 42.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 41.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 41.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 41.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 41.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 41.2
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 40.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 40.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 40.8
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 40.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 40.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 40.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 40.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 40.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 39.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 39.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 39.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 39.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 39.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 39.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 39.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 39.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 38.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 38.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 38.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 38.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 38.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 38.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 37.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 37.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 37.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 37.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 37.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 36.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 36.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 35.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 35.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 35.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 34.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 34.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 34.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 34.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 33.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 33.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 33.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 33.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 33.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 32.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 32.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 31.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 31.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 31.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 30.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 30.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 30.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 29.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 29.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 29.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 29.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 28.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 28.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 27.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 27.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 26.3
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 19.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

4.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 4.6
FF:10176-103C5 60 years, female 4.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.2
Pig sample Sample description nTPM
Putamen
nTPM: 28.2
Samples: 4

Max nTPM: 33.8
Min nTPM: 21.5
Sample A Female 28.4
Sample B Female 21.5
Sample C Male 33.8
Sample D Male 29.0

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