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RNF38
HPA
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  • SUMMARY

  • TISSUE

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  • BLOOD

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  • STRUCTURE

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  • RNF38
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:27.2 nTPM
GTEx:9.4 nTPM
FANTOM5:17.4 Scaled Tags Per Million
Pig:51.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.2
Sample id Sample description nTPM
Putamen
nTPM: 27.2
2482 Female, age 94, left hemisphere 31.7
1829 Male, age 74, unknown 29.1
1937 Female, age 91, right hemisphere 28.7
2647 Male, age 75, left hemisphere 27.1
1838 Male, age 80, right hemisphere 25.8
2466 Female, age 79, unknown 25.0
2489 Female, age 72, unknown 23.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 9.4
Samples: 254

Max nTPM: 17.0
Min nTPM: 5.5
Std nTPM: 1.5
Median nTPM: 9.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 17.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 15.3
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 14.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 13.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 13.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 13.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 12.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 12.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 12.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 12.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 12.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 12.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 11.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 11.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 11.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 11.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 11.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 11.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 11.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 11.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 11.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 11.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 11.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 11.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 11.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 11.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 11.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 11.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 11.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 11.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 11.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 11.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 11.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 11.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 11.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 10.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 10.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 10.9
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 10.9
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 10.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 10.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 10.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 10.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 10.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 10.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 10.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 10.7
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 10.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 10.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 10.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 10.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 10.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 10.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 10.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 10.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 10.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 10.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 10.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 10.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 10.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 10.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 10.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 10.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 10.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 10.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 10.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 10.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 10.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 10.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 10.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 10.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 10.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 10.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 10.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 10.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 10.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 10.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 10.1
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 10.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 10.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 10.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 10.0
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 10.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 10.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 10.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 9.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 9.9
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 9.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 9.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 9.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 9.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 9.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 9.9
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 9.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 9.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 9.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 9.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 9.7
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 9.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 9.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 9.7
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 9.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 9.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 9.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 9.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 9.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 9.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 9.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 9.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 9.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 9.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 9.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 9.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 9.5
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 9.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 9.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 9.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 9.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 9.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 9.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 9.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 9.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 9.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 9.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 9.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 9.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 9.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 9.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 9.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 9.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 9.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 9.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 9.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 9.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 9.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 9.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 9.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 9.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 9.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 9.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 9.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 9.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 9.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 9.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 9.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 9.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 9.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 9.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 9.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 9.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 9.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 9.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 9.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 9.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 9.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 8.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 8.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 8.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 8.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 8.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 8.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 8.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 8.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 8.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 8.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 8.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 8.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 8.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 8.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 8.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 8.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 8.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 8.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 8.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 8.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 8.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 8.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 8.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 8.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 8.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 8.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 8.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 8.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 8.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 8.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 8.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 8.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 8.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 8.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 8.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 8.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 8.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 8.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 8.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 8.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 8.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 8.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 8.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 8.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 8.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 8.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 8.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 8.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 8.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 8.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 8.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 8.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 8.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 8.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 8.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 8.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 8.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 8.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 8.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 8.0
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 8.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 7.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 7.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 7.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 7.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 7.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 7.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 7.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 7.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 7.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 7.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 7.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 7.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 7.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 7.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 7.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 7.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 7.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 7.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 7.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 7.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 7.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 7.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 7.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 7.2
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 7.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 7.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 7.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 7.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 7.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 6.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 6.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 6.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 6.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 6.4
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 6.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 6.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 5.5
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

17.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 17.4
FF:10176-103C5 60 years, female 17.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.1
Pig sample Sample description nTPM
Putamen
nTPM: 51.1
Samples: 4

Max nTPM: 64.0
Min nTPM: 44.6
Sample A Female 45.2
Sample B Female 44.6
Sample C Male 64.0
Sample D Male 50.6

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