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  • TISSUE

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TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:120.3 nTPM
GTEx:194.2 nTPM
FANTOM5:349.0 Scaled Tags Per Million
Pig:278.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.3
Sample id Sample description nTPM
Putamen
nTPM: 120.3
1937 Female, age 91, right hemisphere 164.6
1838 Male, age 80, right hemisphere 146.2
2482 Female, age 94, left hemisphere 137.6
2466 Female, age 79, unknown 110.4
1829 Male, age 74, unknown 107.8
2647 Male, age 75, left hemisphere 97.2
2489 Female, age 72, unknown 78.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

194.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 194.2
Samples: 254

Max nTPM: 382.6
Min nTPM: 97.1
Std nTPM: 49.3
Median nTPM: 188.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 382.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 350.1
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 330.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 326.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 324.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 314.2
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 311.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 308.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 305.8
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 299.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 297.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 296.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 290.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 286.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 283.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 278.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 273.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 270.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 266.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 263.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 261.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 261.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 260.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 258.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 257.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 256.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 255.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 254.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 254.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 253.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 253.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 252.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 252.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 251.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 251.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 251.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 249.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 248.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 248.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 247.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 246.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 245.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 244.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 243.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 242.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 242.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 241.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 240.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 238.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 237.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 236.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 236.2
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 235.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 233.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 231.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 231.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 231.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 230.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 229.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 227.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 226.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 226.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 223.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 222.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 220.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 220.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 219.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 218.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 217.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 216.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 216.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 216.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 215.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 215.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 214.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 214.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 214.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 213.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 212.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 212.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 210.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 210.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 210.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 208.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 207.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 207.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 206.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 205.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 204.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 203.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 202.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 202.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 202.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 202.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 202.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 202.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 202.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 202.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 200.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 200.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 200.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 199.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 199.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 199.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 199.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 198.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 198.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 196.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 196.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 195.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 195.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 194.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 192.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 192.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 191.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 191.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 191.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 191.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 191.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 190.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 190.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 189.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 189.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 189.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 189.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 189.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 188.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 187.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 187.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 187.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 186.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 186.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 186.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 185.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 184.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 184.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 184.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 183.4
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 182.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 181.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 181.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 180.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 180.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 180.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 179.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 179.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 179.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 179.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 178.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 178.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 178.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 176.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 176.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 175.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 175.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 174.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 173.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 173.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 172.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 172.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 171.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 170.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 170.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 170.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 170.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 169.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 168.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 168.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 167.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 167.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 166.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 165.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 165.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 165.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 165.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 165.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 165.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 165.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 165.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 164.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 163.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 162.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 161.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 161.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 161.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 160.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 159.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 159.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 158.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 158.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 157.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 156.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 156.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 155.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 154.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 153.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 152.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 151.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 150.8
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 150.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 150.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 150.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 149.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 149.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 149.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 149.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 147.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 147.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 146.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 146.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 145.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 145.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 145.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 144.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 143.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 143.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 143.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 142.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 142.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 142.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 141.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 140.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 139.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 139.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 138.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 138.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 138.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 137.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 137.1
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 136.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 136.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 135.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 135.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 135.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 135.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 133.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 132.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 132.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 132.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 131.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 130.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 129.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 127.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 127.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 126.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 126.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 125.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 122.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 119.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 118.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 113.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 104.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 100.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 97.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

349.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 349.0
FF:10176-103C5 60 years, female 349.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

278.1
Pig sample Sample description nTPM
Putamen
nTPM: 278.1
Samples: 4

Max nTPM: 378.0
Min nTPM: 216.1
Sample A Female 216.1
Sample B Female 223.0
Sample C Male 378.0
Sample D Male 295.2

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