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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
38.5
nTPM
HPA Brain:
142.0
nTPM
GTEx:
38.5
nTPM
FANTOM5:
135.3
Scaled Tags Per Million
Pig:
35.0
nTPM
Mouse:
128.9
nTPM
Allen mouse:
12.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
142.0
Sample id
Sample description
nTPM
Amygdala nTPM: 85.4
2517
Female, age 94, left hemisphere
107.9
1987
Female, age 91, left hemisphere
99.9
2814
Male, age 76, right hemisphere
85.0
2514
Male, age 75, right hemisphere
79.5
2695
Female, age 67, right hemisphere
54.6
Basal amygdala nTPM: 142.0
2110
Male, age 80, left hemisphere
173.5
2685
Female, age 94, left hemisphere
161.4
2243
Female, age 91, right hemisphere
156.2
2827
Female, age 67, right hemisphere
149.3
2609
Male, age 75, right hemisphere
108.5
1955
Male, age 76, both hemispheres
103.3
Central amygdala nTPM: 107.2
2826
Female, age 94, left hemisphere
140.3
2239
Male, age 80, left hemisphere
132.9
2701
Female, age 91, right hemisphere
94.2
2515
Male, age 75, right hemisphere
87.6
1905
Male, age 76, both hemispheres
81.1
Corticomedial amygdala nTPM: 134.5
2535
Female, age 67, right hemisphere
174.9
2829
Male, age 80, left hemisphere
157.8
2242
Female, age 91, right hemisphere
146.0
2429
Female, age 94, left hemisphere
136.9
2240
Male, age 76, both hemispheres
97.1
2428
Male, age 75, right hemisphere
94.5
Lateral amygdala nTPM: 115.6
2534
Female, age 94, left hemisphere
162.7
2256
Male, age 80, left hemisphere
123.9
1883
Male, age 76, both hemispheres
118.9
2255
Female, age 91, right hemisphere
112.4
2830
Female, age 67, right hemisphere
102.5
2516
Male, age 75, right hemisphere
73.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
38.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 38.5
Samples: 152
Max nTPM: 85.8
Min nTPM: 4.3
Std nTPM: 18.5
Median nTPM: 38.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
85.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
81.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
81.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
79.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
76.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
75.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
74.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
71.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
70.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
69.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
69.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
69.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
65.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
63.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
63.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
63.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
62.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
61.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
60.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
60.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
60.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
59.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
58.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
58.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
57.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
56.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
56.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
55.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
54.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
54.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
54.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
54.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
54.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
53.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
53.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
52.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
52.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
52.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
50.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
50.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
50.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
49.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
49.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
49.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
49.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
48.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
48.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
48.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
47.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
47.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
46.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
45.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
45.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
45.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
45.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
45.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
45.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
44.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
44.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
44.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
44.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
43.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
43.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
43.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
43.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
43.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
42.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
42.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
42.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
42.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
41.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
40.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
40.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
39.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
39.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
38.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
38.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
37.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
37.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
36.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
35.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
35.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
34.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
34.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
33.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
32.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
31.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
31.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
30.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
30.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
29.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
29.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
29.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
29.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
28.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
28.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
27.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
27.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
27.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
26.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
26.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
26.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
26.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
26.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
26.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
25.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
25.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
25.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
24.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
24.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
24.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
24.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
22.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
22.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
22.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
22.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
21.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
21.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
21.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
21.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
20.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
20.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
20.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
20.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
19.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
19.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
19.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
19.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
18.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
18.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
17.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
17.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
17.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
16.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
16.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
16.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
16.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
16.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
15.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
14.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
14.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
14.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
14.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
14.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
13.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
12.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
11.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
8.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
8.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
7.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
6.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
4.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
128.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 128.9
Samples: 4
Max nTPM: 137.3
Min nTPM: 124.2
Sample A
Male
128.9
Sample B
Male
125.0
Sample C
Female
137.3
Sample D
Female
124.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.