We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
FADS2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • FADS2
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:146.8 nTPM
GTEx:117.5 nTPM
FANTOM5:155.3 Scaled Tags Per Million
Pig:119.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

146.8
Sample id Sample description nTPM
Putamen
nTPM: 146.8
2647 Male, age 75, left hemisphere 201.7
2482 Female, age 94, left hemisphere 199.2
2489 Female, age 72, unknown 156.0
1937 Female, age 91, right hemisphere 126.1
1829 Male, age 74, unknown 124.0
2466 Female, age 79, unknown 111.2
1838 Male, age 80, right hemisphere 109.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 117.5
Samples: 254

Max nTPM: 333.3
Min nTPM: 19.2
Std nTPM: 53.5
Median nTPM: 108.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 333.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 304.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 273.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 267.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 267.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 251.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 245.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 241.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 238.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 231.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 230.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 226.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 224.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 222.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 218.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 210.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 209.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 208.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 206.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 200.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 200.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 198.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 192.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 188.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 185.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 183.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 182.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 182.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 179.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 179.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 176.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 176.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 175.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 175.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 175.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 175.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 171.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 170.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 170.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 170.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 168.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 168.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 167.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 166.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 166.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 165.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 163.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 162.4
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 160.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 158.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 158.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 158.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 153.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 150.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 150.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 150.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 149.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 149.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 149.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 148.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 148.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 146.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 145.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 144.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 143.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 142.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 142.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 142.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 141.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 140.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 140.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 140.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 139.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 139.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 137.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 137.4
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 137.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 136.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 136.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 135.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 134.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 134.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 133.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 133.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 132.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 131.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 131.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 131.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 131.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 130.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 130.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 129.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 128.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 127.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 127.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 127.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 126.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 126.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 125.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 125.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 123.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 122.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 121.8
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 121.5
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 120.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 120.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 120.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 118.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 118.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 117.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 116.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 115.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 114.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 114.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 112.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 112.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 112.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 112.1
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 112.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 111.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 111.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 110.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 110.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 109.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 109.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 109.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 108.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 107.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 107.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 107.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 107.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 106.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 106.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 106.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 106.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 105.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 104.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 104.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 103.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 103.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 103.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 101.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 100.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 100.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 99.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 99.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 99.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 99.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 99.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 98.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 98.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 98.2
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 97.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 97.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 97.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 96.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 95.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 94.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 94.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 94.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 94.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 94.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 93.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 93.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 93.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 93.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 92.6
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 92.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 92.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 91.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 89.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 89.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 89.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 89.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 88.1
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 87.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 87.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 86.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 85.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 84.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 83.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 83.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 82.9
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 82.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 82.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 81.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 81.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 80.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 80.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 79.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 79.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 79.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 79.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 76.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 76.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 76.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 76.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 75.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 74.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 74.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 73.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 73.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 73.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 73.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 71.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 71.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 71.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 70.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 70.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 70.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 69.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 69.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 68.8
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 68.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 68.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 68.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 67.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 66.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 65.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 64.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 63.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 62.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 61.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 60.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 58.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 57.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 56.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 55.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 55.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 55.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 54.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 53.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 52.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 52.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 52.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 51.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 51.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 50.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 49.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 48.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 46.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 46.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 42.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 42.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 41.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 41.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 39.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 35.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 32.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 31.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 30.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 29.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 20.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 19.2
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

155.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 155.3
FF:10176-103C5 60 years, female 155.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

119.9
Pig sample Sample description nTPM
Putamen
nTPM: 119.9
Samples: 4

Max nTPM: 142.9
Min nTPM: 95.2
Sample A Female 142.9
Sample B Female 95.2
Sample C Male 119.0
Sample D Male 122.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo