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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
203.3
nTPM
HPA Brain:
163.0
nTPM
GTEx:
203.3
nTPM
FANTOM5:
207.1
Scaled Tags Per Million
Pig:
0.0
nTPM
Mouse:
501.3
nTPM
Allen mouse:
17.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
163.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 134.3
2411
Female, age 72, unknown
175.7
2019
Male, age 18, unknown
162.1
1827
Male, age 72, unknown
148.3
1870
Female, age 42, unknown
138.9
1833
Male, age 53, unknown
128.5
2219
Male, age 76, both hemispheres
123.8
1830
Male, age 51, unknown
123.5
2666
Male, age 74, left hemisphere
123.2
2828
Female, age 72, unknown
121.6
2586
Male, age 75, left hemisphere
97.3
Dorsal raphe nucleus nTPM: 140.8
2298
Female, age 72, unknown
169.8
2750
Male, age 76, both hemispheres
161.2
2047
Male, age 72, unknown
139.1
1828
Male, age 53, unknown
134.6
2016
Female, age 72, unknown
99.1
Inferior colliculus nTPM: 126.8
2097
Female, age 72, unknown
150.9
1848
Female, age 42, unknown
128.3
1890
Male, age 53, unknown
116.8
2849
Male, age 72, unknown
111.4
Median raphe nucleus nTPM: 163.0
2220
Male, age 76, midline
163.0
Periaquaductal grey, anterior nTPM: 140.3
1947
Male, age 18, unknown
159.7
2502
Female, age 75, unknown
132.5
1795
Male, age 51, unknown
128.7
Periaquaductal grey, dorsal nTPM: 108.0
2464
Female, age 72, unknown
112.0
1840
Male, age 53, unknown
111.7
2850
Male, age 76, both hemispheres
106.9
1831
Male, age 72, unknown
101.4
Periaquaductal grey, lateral nTPM: 110.9
2272
Male, age 74, both hemispheres
126.6
2053
Male, age 18, unknown
104.2
2140
Male, age 76, both hemispheres
101.8
Pretectal area nTPM: 149.3
1817
Female, age 42, unknown
191.2
2007
Male, age 72, unknown
190.0
1944
Female, age 72, unknown
178.5
1816
Male, age 51, unknown
178.0
1815
Male, age 53, unknown
163.2
2667
Female, age 75, unknown
149.8
2224
Female, age 72, unknown
141.7
2273
Male, age 74, both hemispheres
124.9
2825
Male, age 18, unknown
113.1
2316
Male, age 76, right hemisphere
107.1
2407
Male, age 75, both hemispheres
104.7
Red nucleus nTPM: 140.1
1821
Female, age 72, unknown
187.5
2785
Male, age 18, unknown
152.2
1865
Male, age 51, unknown
149.1
2725
Female, age 75, unknown
148.3
1954
Female, age 42, unknown
142.5
1904
Male, age 53, unknown
139.1
2823
Male, age 76, right hemisphere
138.0
2227
Male, age 72, unknown
129.3
2769
Male, age 72, unknown
128.6
2503
Female, age 72, unknown
127.7
2588
Male, age 74, left hemisphere
121.0
2584
Male, age 75, left hemisphere
117.8
Substantia nigra nTPM: 152.5
1916
Female, age 42, unknown
195.0
1941
Male, age 53, unknown
179.6
1889
Female, age 72, unknown
178.7
2241
Male, age 72, unknown
172.2
1851
Male, age 51, unknown
171.7
2409
Female, age 72, unknown
142.6
2590
Female, age 75, unknown
128.4
2699
Male, age 18, unknown
121.7
2665
Male, age 74, both hemispheres
118.5
2583
Male, age 75, right hemisphere
116.3
Superior colliculus nTPM: 129.5
2587
Male, age 74, left hemisphere
151.4
2087
Female, age 72, unknown
146.5
2668
Female, age 75, unknown
143.3
1796
Male, age 53, unknown
141.4
1895
Male, age 76, right hemisphere
140.4
2261
Male, age 18, unknown
140.1
1913
Female, age 42, unknown
127.4
1839
Male, age 51, unknown
114.5
1995
Male, age 72, unknown
106.0
2664
Male, age 75, both hemispheres
84.0
Ventral tegmental area nTPM: 151.3
2410
Female, age 72, unknown
195.2
2218
Male, age 76, both hemispheres
159.3
1915
Female, age 42, unknown
159.1
2223
Female, age 72, unknown
154.5
1942
Male, age 51, unknown
128.9
2021
Male, age 53, unknown
110.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
203.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 203.3
Samples: 139
Max nTPM: 523.4
Min nTPM: 99.0
Std nTPM: 65.1
Median nTPM: 190.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
523.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
440.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
395.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
361.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
361.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
330.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
325.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
310.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
310.7
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
307.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
306.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
291.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
284.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
278.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
273.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
271.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
270.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
269.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
267.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
267.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
264.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
261.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
259.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
256.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
253.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
248.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
248.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
246.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
246.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
246.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
242.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
238.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
234.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
231.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
231.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
230.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
228.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
227.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
227.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
223.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
223.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
220.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
220.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
217.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
217.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
216.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
215.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
214.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
213.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
213.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
213.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
212.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
211.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
211.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
211.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
209.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
208.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
207.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
202.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
202.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
201.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
201.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
198.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
194.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
194.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
192.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
191.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
191.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
191.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
190.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
188.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
188.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
186.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
184.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
180.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
180.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
179.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
179.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
177.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
176.8
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
176.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
176.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
176.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
175.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
174.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
174.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
174.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
173.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
173.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
172.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
171.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
171.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
170.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
167.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
166.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
166.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
163.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
163.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
162.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
161.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
159.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
158.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
157.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
156.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
155.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
155.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
153.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
153.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
152.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
151.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
151.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
151.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
150.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
150.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
149.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
149.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
148.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
146.3
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
145.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
144.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
144.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
141.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
140.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
140.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
139.6
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
138.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
137.4
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
135.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
134.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
133.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
133.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
130.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
130.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
129.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
126.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
124.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
110.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
102.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
99.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
501.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 501.4
Samples: 4
Max nTPM: 504.2
Min nTPM: 496.3
Sample A
Male
503.2
Sample B
Male
501.7
Sample C
Female
504.2
Sample D
Female
496.3
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.