COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: Low
RNA expressioni
Consensus:15.8 nTPM
HPA:8.5 nTPM
GTEx:15.8 nTPM
FANTOM5:33.3 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION

COLON - Antibody stainingi
Antibody HPA025924
Endothelial cells Medium
Glandular cells High
Peripheral nerve/ganglion Low



COLON - HPA RNA-seqi
Average nTPMi 8.5
overview
Male, age 54
Colon sample 67
nTPM: 11.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 11.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 11.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 11.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 4.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 8.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 10.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 4.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 9.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 5.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 9.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 5.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 6.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 15.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 15.8
Samples: 419

Max nTPM: 42.1
Min nTPM: 5.5
Std nTPM: 5.8
Median nTPM: 15.1
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 42.1
GTEX-1NV5F-2426-SM-GPIAM 60-69 years, female 36.5
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 35.6
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 33.1
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 32.9
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 32.2
GTEX-14BIL-2726-SM-GRR1V 50-59 years, male 29.2
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 28.9
GTEX-11O72-2526-SM-GJ3PW 40-49 years, male 28.6
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 27.8
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 27.6
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Colon - Transverse
Average nTPM: 14.2
Samples: 479

Max nTPM: 49.6
Min nTPM: 3.8
Std nTPM: 5.9
Median nTPM: 13.1
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 49.6
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 38.8
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 35.6
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 33.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 31.7
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 31.2
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 31.1
GTEX-OXRK-1726-SM-G8W7C 50-59 years, female 31.1
GTEX-WOFL-2626-SM-F21IV 60-69 years, male 31.1
GTEX-1H11D-2626-SM-9JGH4 40-49 years, male 30.8
GTEX-Q734-1126-SM-48TZY 40-49 years, female 30.4
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 33.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 33.3
FF:10014-101C5 62,83,84 years, mixed 33.3

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