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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
108.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 108.1
Samples: 105
Max nTPM: 147.3
Min nTPM: 70.5
Std nTPM: 15.9
Median nTPM:
495_1
57 years, female
147.3
321_1
62 years, female
142.9
293_1
68 years, female
135.8
308_1
70 years, female
132.7
2_1
77 years, female
132.3
526_1
61 years, male
131.8
319_1
81 years, male
131.4
172_1
72 years, female
131.0
425_1
59 years, female
127.6
389_1
86 years, female
127.4
405_1
91 years, male
127.0
126_1
63 years, male
126.3
189_1
76 years, male
125.9
376_1
75 years, female
124.8
377_1
82 years, female
124.1
251_1
78 years, male
123.9
415_1
77 years, female
123.8
347_1
72 years, male
123.5
177_1
74 years, male
123.2
153_1
70 years, female
123.0
311_1
78 years, male
122.9
307_1
66 years, female
122.3
352_1
62 years, male
121.8
237_1
82 years, male
121.7
335_1
73 years, female
121.5
246_1
77 years, male
121.2
322_1
76 years, male
121.1
229_1
69 years, female
120.8
350_1
84 years, female
120.8
35_1
74 years, female
120.2
6_1
73 years, female
120.1
243_1
75 years, male
119.2
386_1
76 years, male
119.0
163_1
78 years, male
118.3
447_1
81 years, male
117.3
316_1
62 years, male
117.1
266_1
85 years, male
116.9
9_1
66 years, female
116.7
115_1
83 years, male
115.6
375_1
74 years, female
114.8
218_1
71 years, female
114.3
406_1
79 years, male
113.9
41_1
94 years, female
113.7
468_1
89 years, male
113.3
292_1
71 years, male
112.1
320_1
89 years, female
112.1
348_1
84 years, male
111.6
18_1
88 years, male
111.5
217_1
76 years, male
111.3
480_1
63 years, male
109.5
324_1
76 years, male
109.4
145_1
84 years, male
109.1
162_1
79 years, female
107.9
384_1
83 years, male
107.9
286_1
68 years, female
106.9
313_1
79 years, female
106.8
518_1
75 years, female
106.7
414_1
84 years, female
106.4
315_1
62 years, female
105.9
349_1
83 years, male
105.9
137_1
83 years, male
105.0
117_1
61 years, male
103.6
353_1
82 years, female
103.6
499_1
55 years, female
102.7
503_1
68 years, male
102.5
355_1
70 years, female
102.4
404_1
82 years, female
102.3
394_1
75 years, female
101.7
99_1
64 years, male
101.4
17_1
71 years, male
101.1
265_1
87 years, male
100.9
354_1
81 years, female
100.0
396_1
62 years, male
99.5
351_1
91 years, male
99.1
317_1
60 years, male
98.8
81_1
67 years, male
98.4
109_1
81 years, female
97.9
254_1
77 years, female
97.3
379_1
60 years, male
96.8
173_1
67 years, male
96.5
318_1
68 years, male
95.8
466_1
57 years, female
95.3
517_1
88 years, male
94.5
490_1
67 years, female
94.1
142_1
61 years, female
93.6
119_1
70 years, female
93.0
32_1
67 years, male
92.7
356_1
87 years, female
92.1
291_1
76 years, male
91.1
506_1
65 years, male
90.7
264_1
73 years, female
89.4
120_1
70 years, female
89.0
42_1
85 years, male
88.3
139_1
64 years, female
87.8
452_1
88 years, female
84.9
4_1
88 years, female
84.8
491_1
89 years, female
84.5
501_1
88 years, male
83.7
89_1
63 years, male
82.9
43_1
64 years, female
81.5
413_1
59 years, female
81.5
149_1
88 years, male
76.1
295_1
61 years, female
75.9
288_1
66 years, female
75.1
314_1
67 years, male
70.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
