We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PRDX1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • PRDX1
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:205.3 nTPM
GTEx:401.4 nTPM
FANTOM5:262.8 Scaled Tags Per Million
Pig:103.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

205.3
Sample id Sample description nTPM
Putamen
nTPM: 205.3
2482 Female, age 94, left hemisphere 362.2
1937 Female, age 91, right hemisphere 207.5
2466 Female, age 79, unknown 199.6
1829 Male, age 74, unknown 198.6
1838 Male, age 80, right hemisphere 166.7
2489 Female, age 72, unknown 161.5
2647 Male, age 75, left hemisphere 141.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

401.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 401.4
Samples: 254

Max nTPM: 799.8
Min nTPM: 197.1
Std nTPM: 118.6
Median nTPM: 384.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 799.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 786.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 733.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 725.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 710.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 708.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 680.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 679.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 668.9
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 654.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 651.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 641.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 637.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 630.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 618.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 618.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 611.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 602.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 589.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 583.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 580.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 579.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 578.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 574.1
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 570.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 554.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 552.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 550.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 549.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 545.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 543.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 539.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 536.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 533.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 529.4
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 527.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 526.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 524.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 524.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 523.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 522.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 513.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 513.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 510.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 508.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 507.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 504.1
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 503.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 502.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 500.9
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 500.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 497.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 494.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 489.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 486.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 486.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 485.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 485.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 484.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 478.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 478.0
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 477.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 474.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 473.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 472.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 471.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 471.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 470.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 468.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 465.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 464.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 462.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 461.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 461.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 460.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 457.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 456.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 456.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 455.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 453.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 451.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 447.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 447.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 443.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 442.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 436.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 436.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 435.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 432.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 428.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 428.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 427.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 426.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 424.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 421.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 421.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 420.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 412.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 411.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 409.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 409.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 407.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 406.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 406.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 405.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 404.2
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 404.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 403.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 403.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 401.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 399.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 398.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 395.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 394.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 393.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 391.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 391.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 390.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 390.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 389.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 387.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 386.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 386.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 385.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 385.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 385.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 385.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 384.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 380.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 378.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 378.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 378.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 374.9
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 372.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 371.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 370.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 368.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 367.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 365.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 365.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 365.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 364.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 364.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 364.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 362.9
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 362.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 362.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 359.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 357.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 357.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 356.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 354.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 354.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 354.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 353.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 352.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 346.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 345.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 345.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 340.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 339.4
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 339.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 337.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 336.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 336.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 335.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 333.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 332.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 332.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 330.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 330.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 330.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 330.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 327.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 327.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 326.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 325.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 323.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 323.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 322.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 321.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 320.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 319.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 319.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 315.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 314.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 313.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 313.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 312.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 311.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 311.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 311.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 310.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 306.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 305.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 303.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 300.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 297.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 297.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 297.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 297.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 297.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 294.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 292.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 292.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 292.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 291.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 290.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 289.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 289.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 289.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 287.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 287.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 286.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 286.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 283.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 283.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 282.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 282.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 281.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 281.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 279.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 278.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 277.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 276.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 272.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 272.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 271.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 269.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 266.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 265.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 265.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 264.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 263.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 263.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 259.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 258.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 256.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 255.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 254.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 253.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 248.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 248.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 247.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 245.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 243.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 236.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 228.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 210.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 204.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 203.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 199.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 199.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 197.1
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

262.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 262.8
FF:10176-103C5 60 years, female 262.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.1
Pig sample Sample description nTPM
Putamen
nTPM: 103.1
Samples: 4

Max nTPM: 131.3
Min nTPM: 72.1
Sample A Female 131.3
Sample B Female 72.1
Sample C Male 115.0
Sample D Male 94.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo