COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
RNA expressioni
Consensus:40.6 nTPM
HPA:18.5 nTPM
GTEx:40.6 nTPM
FANTOM5:71.7 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION

COLON - Antibody stainingi
Antibody HPA044810Antibody CAB013488
Endothelial cells -High
Glandular cells LowLow
Peripheral nerve/ganglion -Not detected


COLON - HPA RNA-seqi
Average nTPMi 18.5
overview
Male, age 54
Colon sample 67
nTPM: 14.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 12.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 8.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 28
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 21.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 40.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 15.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 6.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 21.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 8.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 14.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 23.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 23.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 40.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 40.6
Samples: 419

Max nTPM: 112.3
Min nTPM: 4.6
Std nTPM: 15.6
Median nTPM: 39.4
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 112.3
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 109.8
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 109.0
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 105.4
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 97.5
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 85.3
GTEX-ZE9C-2126-SM-4WKGY 60-69 years, male 83.4
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 82.6
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 80.5
GTEX-1C64N-2226-SM-7SB7C 50-59 years, male 78.5
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 78.4
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Colon - Transverse
Average nTPM: 22.5
Samples: 479

Max nTPM: 78.4
Min nTPM: 3.2
Std nTPM: 15.7
Median nTPM: 18.9
GTEX-1LGOU-1626-SM-D3LAK 20-29 years, female 78.4
GTEX-R45C-2126-SM-EZ6KZ 60-69 years, female 76.7
GTEX-14C5O-2526-SM-5P9I5 60-69 years, male 74.8
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 67.5
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 67.2
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 67.2
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 65.5
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 63.3
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 60.2
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 59.4
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 59.3
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 71.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 71.7
FF:10014-101C5 62,83,84 years, mixed 71.7

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