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ARRDC2
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • ARRDC2
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:30.2 nTPM
GTEx:22.8 nTPM
FANTOM5:15.7 Scaled Tags Per Million
Pig:10.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.2
Sample id Sample description nTPM
Putamen
nTPM: 30.2
2489 Female, age 72, unknown 42.8
2647 Male, age 75, left hemisphere 42.1
1829 Male, age 74, unknown 34.5
2482 Female, age 94, left hemisphere 29.8
2466 Female, age 79, unknown 26.2
1937 Female, age 91, right hemisphere 24.0
1838 Male, age 80, right hemisphere 12.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 22.8
Samples: 254

Max nTPM: 112.7
Min nTPM: 1.7
Std nTPM: 12.4
Median nTPM: 19.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 112.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 76.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 59.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 53.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 48.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 48.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 48.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 46.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 45.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 45.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 44.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 44.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 43.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 43.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 42.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 42.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 41.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 41.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 41.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 41.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 39.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 39.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 39.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 39.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 39.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 39.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 38.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 37.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 37.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 37.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 37.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 36.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 36.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 36.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 36.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 35.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 34.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 34.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 34.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 34.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 34.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 33.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 33.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 33.3
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 32.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 32.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 32.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 32.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 32.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 32.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 31.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 31.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 31.3
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 31.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 30.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 30.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 30.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 30.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 30.5
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 29.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 29.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 28.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 28.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 28.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 28.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 28.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 28.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 28.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 27.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 27.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 27.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 27.3
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 26.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 26.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 26.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 26.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 26.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 26.2
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 26.1
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 26.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 25.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 25.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 25.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 25.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 25.5
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 25.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 25.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 25.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 24.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 24.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 24.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 24.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 23.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 23.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 23.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 23.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 23.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 23.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 23.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 23.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 23.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 23.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 22.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 22.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 22.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 22.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 22.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 22.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 22.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 22.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 22.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 21.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 21.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 21.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 21.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 21.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 21.3
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 21.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 21.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 21.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 21.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 20.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 20.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 20.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 20.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 20.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 20.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 19.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 19.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 19.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 19.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 19.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 19.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 19.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 19.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 19.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 19.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 19.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 19.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 19.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 19.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 19.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 18.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 18.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 18.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 18.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 18.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 18.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 18.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 18.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 18.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 18.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 18.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 18.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 17.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 17.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 17.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 17.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 17.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 17.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 17.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 17.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 17.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 17.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 17.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 17.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 17.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 16.9
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 16.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 16.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 16.7
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 16.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 16.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 15.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 15.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 15.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 15.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 15.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 15.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 15.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 15.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 15.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 15.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 15.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 15.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 15.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 15.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 15.0
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 15.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 14.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 14.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 14.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 14.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 14.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 14.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 14.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 14.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 14.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 13.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 13.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 13.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 13.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 13.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 13.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 13.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 12.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 12.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 12.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 12.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 12.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 12.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 12.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 12.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 12.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 12.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 12.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 11.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 11.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 11.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 11.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 11.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 11.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 11.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 11.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 11.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 11.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 11.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 10.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 10.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 10.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 10.0
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 9.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 9.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 9.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 9.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 9.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 9.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 9.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 8.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 8.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 7.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 7.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 7.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 7.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 7.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 6.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 5.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 5.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 5.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 5.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 4.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 4.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 4.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

15.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 15.7
FF:10176-103C5 60 years, female 15.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.9
Pig sample Sample description nTPM
Putamen
nTPM: 10.9
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.6
Sample A Female 12.4
Sample B Female 10.6
Sample C Male 10.9
Sample D Male 9.6

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