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TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:94.9 nTPM
GTEx:78.6 nTPM
FANTOM5:91.8 Scaled Tags Per Million
Pig:81.0 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.9
Sample id Sample description nTPM
Putamen
nTPM: 94.9
2647 Male, age 75, left hemisphere 120.7
1829 Male, age 74, unknown 104.8
2489 Female, age 72, unknown 99.2
2466 Female, age 79, unknown 98.8
1838 Male, age 80, right hemisphere 83.3
1937 Female, age 91, right hemisphere 81.9
2482 Female, age 94, left hemisphere 75.6

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 78.6
Samples: 254

Max nTPM: 138.9
Min nTPM: 43.5
Std nTPM: 14.9
Median nTPM: 77.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 138.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 125.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 123.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 122.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 115.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 111.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 110.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 110.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 106.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 104.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 104.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 102.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 101.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 100.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 100.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 100.5
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 99.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 99.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 99.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 98.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 98.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 98.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 98.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 98.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 97.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 97.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 95.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 95.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 95.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 95.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 95.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 95.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 95.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 95.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 94.7
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 94.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 94.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 94.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 93.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 93.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 93.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 93.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 93.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 92.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 91.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 91.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 91.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 91.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 91.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 91.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 90.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 90.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 90.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 89.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 89.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 89.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 89.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 89.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 89.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 89.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 89.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 89.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 88.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 88.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 88.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 87.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 87.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 87.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 87.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 86.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 86.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 86.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 86.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 86.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 85.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 85.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 85.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 85.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 84.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 84.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 84.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 84.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 84.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 84.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 84.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 84.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 84.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 83.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 83.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 83.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 83.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 83.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 83.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 83.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 83.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 82.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 82.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 82.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 82.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 82.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 82.4
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 82.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 81.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 81.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 81.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 81.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 80.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 80.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 80.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 80.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 80.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 79.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 79.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 79.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 79.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 79.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 79.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 79.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 78.8
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 78.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 78.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 78.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 78.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 78.1
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 78.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 78.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 77.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 77.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 77.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 77.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 77.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 77.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 77.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 76.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 76.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 76.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 76.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 76.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 75.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 75.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 75.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 75.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 75.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 75.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 75.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 75.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 75.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 74.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 74.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 74.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 74.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 74.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 74.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 74.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 74.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 74.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 74.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 74.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 73.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 73.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 73.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 73.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 72.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 72.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 72.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 72.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 71.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 71.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 71.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 71.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 71.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 71.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 71.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 70.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 70.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 70.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 70.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 70.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 70.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 70.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 69.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 69.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 69.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 68.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 68.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 68.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 68.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 68.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 67.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 67.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 67.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 67.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 67.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 67.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 67.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 67.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 66.9
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 66.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 66.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 66.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 66.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 66.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 66.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 66.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 66.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 65.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 65.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 65.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 65.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 65.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 65.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 65.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 65.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 65.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 64.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 64.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 63.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 63.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 62.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 62.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 62.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 62.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 61.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 61.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 61.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 61.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 60.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 60.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 60.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 60.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 59.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 59.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 59.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 59.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 58.6
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 58.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 58.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 58.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 57.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 57.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 57.0
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 56.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 56.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 55.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 55.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 55.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 52.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 50.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 49.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 48.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 48.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 47.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 44.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 43.5
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

91.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 91.8
FF:10176-103C5 60 years, female 91.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.0
Pig sample Sample description nTPM
Putamen
nTPM: 81.0
Samples: 4

Max nTPM: 95.4
Min nTPM: 69.6
Sample A Female 69.6
Sample B Female 73.8
Sample C Male 85.2
Sample D Male 95.4

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