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  • TISSUE

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  • HM13
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:34.1 nTPM
GTEx:22.9 nTPM
FANTOM5:78.8 Scaled Tags Per Million
Pig:43.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.1
Sample id Sample description nTPM
Putamen
nTPM: 34.1
2482 Female, age 94, left hemisphere 44.3
1838 Male, age 80, right hemisphere 37.8
1937 Female, age 91, right hemisphere 34.9
1829 Male, age 74, unknown 32.8
2489 Female, age 72, unknown 32.5
2466 Female, age 79, unknown 32.3
2647 Male, age 75, left hemisphere 24.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 22.9
Samples: 254

Max nTPM: 99.0
Min nTPM: 6.3
Std nTPM: 8.8
Median nTPM: 22.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 99.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 51.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 51.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 44.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 42.1
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 39.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 37.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 36.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 36.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 36.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 36.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 36.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 36.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 35.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 35.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 35.5
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 35.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 34.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 34.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 33.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 33.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 33.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 32.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 32.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 32.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 32.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 31.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 31.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 31.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 31.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 30.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 30.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 30.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 30.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 30.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 29.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 29.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 29.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 29.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 28.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 28.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 28.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 28.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 28.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 28.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 28.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 28.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 28.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 28.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 28.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 28.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 28.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 28.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 28.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 28.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 27.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 27.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 27.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 27.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 27.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 27.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 27.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 27.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 27.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 27.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 27.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 27.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 27.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 27.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 27.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 26.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 26.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 26.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 26.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 26.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 26.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 26.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 26.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 26.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 26.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 25.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 25.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 25.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 25.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 25.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 25.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 25.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 25.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 25.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 25.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 25.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 25.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 25.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 25.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 24.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 24.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 24.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 24.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 24.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 24.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 24.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 24.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 24.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 24.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 23.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 23.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 23.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 23.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 23.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 23.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 23.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 23.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 23.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 23.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 23.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 23.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 23.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 22.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 22.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 22.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 22.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 22.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 22.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 22.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 22.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 22.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 22.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 22.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 22.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 21.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 21.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 21.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 21.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 21.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 21.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 21.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 21.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 21.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 21.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 21.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 21.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 21.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 21.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 21.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 21.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 20.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 20.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 20.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 20.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 20.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 20.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 20.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 20.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 20.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 20.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 20.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 20.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 20.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 19.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 19.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 19.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 19.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 19.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 19.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 19.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 19.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 19.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 19.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 19.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 19.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 19.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 19.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 19.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 18.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 18.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 18.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 18.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 18.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 18.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 18.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 18.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 18.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 18.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 18.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 18.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 18.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 17.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 17.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 17.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 17.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 17.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 17.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 17.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 17.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 17.0
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 17.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 17.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 16.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 16.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 16.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 16.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 16.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 16.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 16.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 16.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 16.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 16.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 16.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 16.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 15.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 15.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 15.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 15.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 15.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 15.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 15.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 15.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 15.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 15.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 15.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 15.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 15.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 14.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 14.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 14.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 14.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 14.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 14.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 13.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 13.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 13.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 13.6
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 13.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 12.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 12.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 12.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 12.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 11.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 11.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 11.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 10.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 10.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 10.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 10.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 9.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 9.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 9.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 8.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 8.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 7.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 7.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 7.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 6.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 6.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

78.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 78.8
FF:10176-103C5 60 years, female 78.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.8
Pig sample Sample description nTPM
Putamen
nTPM: 43.8
Samples: 4

Max nTPM: 49.2
Min nTPM: 37.1
Sample A Female 48.7
Sample B Female 37.1
Sample C Male 40.3
Sample D Male 49.2

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