COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
RNA expressioni
Consensus:35.9 nTPM
HPA:35.9 nTPM
GTEx:24.5 nTPM
FANTOM5:127.4 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION

COLON - Antibody stainingi
Antibody HPA001119Antibody CAB009392
Endothelial cells MediumHigh
Glandular cells MediumHigh
Peripheral nerve/ganglion MediumHigh




COLON - HPA RNA-seqi
Average nTPMi 35.9
overview
Male, age 54
Colon sample 67
nTPM: 39.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 45.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 46.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 36.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 34.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 32.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 36.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 31.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 31.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 43.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 31.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 31.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 24.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 24.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 24.5
Samples: 419

Max nTPM: 43.0
Min nTPM: 13.6
Std nTPM: 4.5
Median nTPM: 24.0
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 43.0
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 40.2
GTEX-1B8KE-1526-SM-7DUG2 50-59 years, male 39.1
GTEX-14E1K-1626-SM-664MO 50-59 years, male 36.9
GTEX-14PK6-1826-SM-69LOM 70-79 years, female 35.9
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 35.7
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 35.6
GTEX-1LG7Z-1326-SM-DIPF3 30-39 years, male 35.5
GTEX-15RIE-2026-SM-7KFRW 60-69 years, male 34.8
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 34.1
GTEX-1399S-1826-SM-GIN9Y 30-39 years, female 33.8
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Colon - Transverse
Average nTPM: 21.8
Samples: 479

Max nTPM: 34.7
Min nTPM: 13.6
Std nTPM: 3.6
Median nTPM: 21.6
GTEX-14JIY-3326-SM-6871E 60-69 years, male 34.7
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 33.1
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 31.9
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 31.8
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 31.8
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 31.7
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 31.7
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 31.2
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 30.8
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 30.6
GTEX-1H11D-2626-SM-9JGH4 40-49 years, male 30.5
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 127.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 127.4
FF:10014-101C5 62,83,84 years, mixed 127.4

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