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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
6397.2
nTPM
Monaco:
8164.2
nTPM
Schmiedel:
2281.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
6397.2
HPA sample
nTPM
gdT-cell nTPM: 3496.2
Samples: 6
Max nTPM: 4657.2
Min nTPM: 2403.9
P10809_1007
3739.8
P10809_1022
3882.8
P10809_1041
4657.2
P10809_1060
2403.9
P10809_1077
2940.8
P10809_1098
3352.4
MAIT T-cell nTPM: 5393.1
Samples: 6
Max nTPM: 6061.6
Min nTPM: 4058.8
P10809_1006
5497.3
P10809_1024
6061.6
P10809_1043
5664.4
P10809_1062
5224.9
P10809_1083
4058.8
P10809_1097
5851.5
Memory CD4 T-cell nTPM: 5007.7
Samples: 6
Max nTPM: 6338.3
Min nTPM: 3695.6
P10809_1014
5881.9
P10809_1026
6338.3
P10809_1045
5676.6
P10809_1064
3911.9
P10809_1086
3695.6
P10809_1113
4542.0
Memory CD8 T-cell nTPM: 4037.7
Samples: 5
Max nTPM: 4947.4
Min nTPM: 3251.9
P10809_1012
4947.4
P10809_1027
3996.5
P10809_1046
4513.4
P10809_1065
3251.9
P10809_1111
3479.2
Naive CD4 T-cell nTPM: 6397.2
Samples: 6
Max nTPM: 8655.6
Min nTPM: 4932.6
P10809_1015
6573.8
P10809_1030
6809.4
P10809_1049
8655.6
P10809_1068
6120.0
P10809_1085
4932.6
P10809_1112
5291.8
Naive CD8 T-cell nTPM: 5127.1
Samples: 6
Max nTPM: 6911.7
Min nTPM: 3061.1
P10809_1016
6911.7
P10809_1031
6194.9
P10809_1050
5095.2
P10809_1069
4757.7
P10809_1087
3061.1
P10809_1110
4742.2
T-reg nTPM: 3678.2
Samples: 6
Max nTPM: 5593.7
Min nTPM: 3119.6
P10809_1018
3449.5
P10809_1037
3351.2
P10809_1056
5593.7
P10809_1075
3217.0
P10809_1094
3338.1
P10809_1106
3119.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
8164.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 5627.0
Samples: 4
Max nTPM: 6502.8
Min nTPM: 3152.3
RHH5202_R3573
6496.7
RHH5230_R3602
6356.1
RHH5259_R3631
3152.3
RHH5288_R3660
6502.8
Effector memory CD8 T-cell nTPM: 3777.3
Samples: 4
Max nTPM: 4893.9
Min nTPM: 2518.4
RHH5203_R3574
4026.3
RHH5231_R3603
4893.9
RHH5260_R3632
2518.4
RHH5289_R3661
3670.4
MAIT T-cell nTPM: 6322.6
Samples: 4
Max nTPM: 8194.2
Min nTPM: 3755.8
RHH5233_R3605
7146.8
RHH5205_R3576
3755.8
RHH5262_R3634
6193.7
RHH5297_R3663
8194.2
Memory CD4 T-cell TFH nTPM: 6869.8
Samples: 4
Max nTPM: 7712.0
Min nTPM: 6386.4
RHH5300_R3666
6901.7
RHH5236_R3608
7712.0
RHH5265_R3637
6386.4
RHH5208_R3579
6478.9
Memory CD4 T-cell Th1 nTPM: 5681.4
Samples: 4
Max nTPM: 7734.4
Min nTPM: 3785.2
RHH5210_R3581
7260.4
RHH5302_R3668
7734.4
RHH5238_R3610
3785.2
RHH5267_R3639
3945.7
Memory CD4 T-cell Th1/Th17 nTPM: 6017.1
Samples: 4
Max nTPM: 8802.8
Min nTPM: 3228.0
RHH5303_R3669
8802.8
RHH5211_R3582
7475.0
RHH5239_R3611
3228.0
RHH5268_R3640
4562.6
Memory CD4 T-cell Th17 nTPM: 5227.4
Samples: 4
Max nTPM: 7023.3
Min nTPM: 3891.4
RHH5304_R3670
6017.6
RHH5212_R3583
7023.3
RHH5240_R3612
3977.3
RHH5269_R3641
3891.4
Memory CD4 T-cell Th2 nTPM: 6973.2
Samples: 4
Max nTPM: 8906.7
Min nTPM: 5331.3
RHH5305_R3671
7242.8
RHH5213_R3584
6412.1
RHH5241_R3613
8906.7
RHH5270_R3642
5331.3
Naive CD4 T-cell nTPM: 8164.2
Samples: 4
Max nTPM: 9523.0
Min nTPM: 5891.0
RHH5306_R3672
9523.0
RHH5214_R3585
8344.9
RHH5242_R3614
8898.0
RHH5271_R3643
5891.0
Naive CD8 T-cell nTPM: 7406.7
Samples: 4
Max nTPM: 9264.8
Min nTPM: 3592.2
RHH5201_R3572
9264.8
RHH5229_R3601
3592.2
RHH5258_R3630
9100.6
RHH5287_R3659
7669.2
Non-Vd2 gdTCR nTPM: 3974.3
Samples: 4
Max nTPM: 4869.2
Min nTPM: 2893.7
RHH5235_R3607
2893.7
RHH5264_R3636
4672.7
RHH5207_R3578
3461.5
RHH5299_R3665
4869.2
T-reg nTPM: 5896.4
Samples: 4
Max nTPM: 7384.7
Min nTPM: 4238.0
RHH5301_R3667
7384.7
RHH5237_R3609
7166.9
RHH5266_R3638
4238.0
RHH5209_R3580
4795.9
Terminal effector memory CD4 T-cell nTPM: 4542.3
Samples: 2
Max nTPM: 6267.7
Min nTPM: 2816.9
RHH5243_R3615
2816.9
RHH5272_R3644
6267.7
Terminal effector memory CD8 T-cell nTPM: 4177.5
Samples: 4
Max nTPM: 5229.5
Min nTPM: 2564.6
RHH5232_R3604
5229.5
RHH5204_R3575
3994.9
RHH5261_R3633
2564.6
RHH5296_R3662
4920.9
Vd2 gdTCR nTPM: 5548.7
Samples: 4
Max nTPM: 6645.9
Min nTPM: 3965.7
RHH5234_R3606
6392.1
RHH5206_R3577
5191.1
RHH5263_R3635
3965.7
RHH5298_R3664
6645.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.