We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TSPO
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • TSPO
TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
Tissue methods
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Medium
Hepatocytes: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:81.6 nTPM
HPA:13.1 nTPM
GTEx:81.6 nTPM
FANTOM5:63.2 Scaled Tags Per Million
LIVER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody CAB011232
Cholangiocytes Medium
Hepatocytes Low



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.1
N/A
Female, age 60
Liver sample 21
nTPM: 29
overview
Male, age 54
Liver sample 23
nTPM: 16.4
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 17.8
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 1.2
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 5.5
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 6.1
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 9.9
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 27
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 9.1
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 8.9
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.6
GTEx sample id Sample description nTPM
Liver
Average nTPM: 81.6
Samples: 262

Max nTPM: 225.8
Min nTPM: 29.9
Std nTPM: 33.1
Median nTPM: 76.4
GTEX-REY6-1226-SM-48FDR 60-69 years, male 225.8
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 218.3
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 200.7
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 181.6
GTEX-14PJO-1726-SM-68719 60-69 years, male 177.2
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 172.1
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 163.6
GTEX-QEL4-1226-SM-447A4 50-59 years, male 162.0
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 158.6
GTEX-16MT8-2126-SM-HAV1Q 60-69 years, female 154.1
GTEX-15UF7-0426-SM-HAV2G 40-49 years, male 152.7
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 152.3
GTEX-1H23P-1826-SM-GA91S 60-69 years, male 150.9
GTEX-S32W-1926-SM-4AD63 50-59 years, female 147.9
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 147.1
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 146.8
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 143.6
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 142.8
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 136.2
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 135.3
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 133.8
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 125.9
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 125.8
GTEX-13OVJ-1026-SM-5IFGI 50-59 years, female 123.9
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 123.4
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 121.7
GTEX-11EMC-0326-SM-HAV2K 60-69 years, female 121.0
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 120.6
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 120.5
GTEX-XPVG-1126-SM-HLJRE 50-59 years, male 120.5
GTEX-14A6H-0726-SM-HAV28 30-39 years, male 120.3
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 119.7
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 119.2
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 119.0
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 116.5
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 115.8
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 115.1
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 114.0
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 110.9
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 109.9
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 109.5
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 109.2
GTEX-1J1OQ-0826-SM-CXZJG 40-49 years, female 108.4
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 107.3
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 107.2
GTEX-WQUQ-1926-SM-4M9QM 60-69 years, male 107.1
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 103.7
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 101.8
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 101.6
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 100.9
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 100.8
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 100.8
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 100.5
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 100.0
GTEX-X261-1726-SM-4PQYT 50-59 years, male 99.5
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 99.0
GTEX-1IDJH-1526-SM-GA8ZW 70-79 years, male 98.7
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 98.5
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 98.2
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 98.2
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 97.7
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 97.5
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 97.2
GTEX-18A66-2026-SM-7189C 60-69 years, male 96.8
GTEX-1B932-1426-SM-793AN 40-49 years, female 96.8
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 96.6
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 96.5
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 96.3
GTEX-S33H-1626-SM-4AD68 30-39 years, male 96.3
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 95.8
GTEX-WK11-1326-SM-4M9QU 50-59 years, male 95.5
GTEX-12696-0826-SM-5EGGE 60-69 years, male 94.7
GTEX-13G51-0626-SM-HK7AV 60-69 years, male 94.7
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 94.0
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 93.6
GTEX-Q734-0326-SM-48U15 40-49 years, female 93.3
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 92.4
GTEX-1R9PM-0526-SM-F2I1T 20-29 years, male 92.2
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 91.8
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 91.8
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 91.4
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 91.4
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 91.2
GTEX-11GSP-0626-SM-5986T 60-69 years, female 91.1
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 90.9
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 90.5
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 90.3
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 90.0
GTEX-14XAO-0226-SM-68728 60-69 years, female 89.8
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 89.4
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 89.1
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 88.9
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 88.9
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 88.6
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 88.5
GTEX-SIU8-1226-SM-HLJRG 50-59 years, male 87.7
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 87.2
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 87.2
GTEX-N7MS-1825-SM-HLJR9 60-69 years, male 87.2
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 87.2
GTEX-P78B-1326-SM-3P611 40-49 years, female 86.1
GTEX-1I1GV-1026-SM-GA8Z8 60-69 years, male 85.7
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 85.6
GTEX-YECK-1926-SM-4W21H 60-69 years, male 85.3
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 85.1
GTEX-1LSNL-2026-SM-HLJQ4 50-59 years, male 83.7
GTEX-1LB8K-1926-SM-HLJQQ 50-59 years, male 83.6
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 82.9
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 82.5
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 82.2
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 82.1
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 81.6
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 80.9
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 80.7
GTEX-OIZF-0826-SM-7MKH9 60-69 years, male 80.7
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 80.7
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 80.4
GTEX-OHPM-0826-SM-HLJRC 50-59 years, male 80.1
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 79.8
GTEX-QXCU-1826-SM-HLJS6 50-59 years, male 79.7
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 79.0
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 78.7
GTEX-15CHQ-0926-SM-HAV1W 60-69 years, male 78.6
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 78.5
GTEX-16Z82-1426-SM-HAV2I 60-69 years, male 78.3
GTEX-14E7W-1526-SM-6871X 70-79 years, male 78.2
GTEX-QESD-2026-SM-447BI 20-29 years, male 78.0
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 77.1
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 77.0
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 76.8
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 76.8
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 76.0
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 75.7
GTEX-1S3DN-1126-SM-HLJQO 50-59 years, male 75.2
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 75.0
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 74.7
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 74.3
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 74.2
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 73.8
GTEX-17F96-1226-SM-79OK2 70-79 years, male 73.5
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 73.5
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 73.3
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 73.3
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 73.2
GTEX-13OVL-0726-SM-HAV29 50-59 years, male 73.1
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 73.1
GTEX-14PHX-0526-SM-664NW 50-59 years, male 72.9
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 72.9
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 72.3
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 72.0
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 71.7
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 71.3
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 71.0
GTEX-1PPGY-2226-SM-F2I29 60-69 years, male 70.7
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 69.7
GTEX-1H1DF-1326-SM-9WPPR 40-49 years, female 68.2
GTEX-111FC-1226-SM-HAV27 60-69 years, male 67.8
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 67.6
GTEX-O5YV-0726-SM-EV798 60-69 years, female 67.4
GTEX-O5YW-0826-SM-HK7A3 50-59 years, male 67.3
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 67.1
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 67.0
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 66.8
GTEX-14JG1-1626-SM-664NH 40-49 years, male 66.6
GTEX-1OJC4-1126-SM-HLJQI 50-59 years, female 66.6
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 66.4
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 66.3
GTEX-13113-1326-SM-5GCOI 60-69 years, female 66.3
GTEX-RU72-1426-SM-46MUF 50-59 years, female 65.8
GTEX-R53T-0326-SM-48FEC 50-59 years, female 65.5
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 65.3
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 64.4
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 64.2
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 64.0
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 64.0
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 63.8
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 63.6
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 63.6
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 63.2
GTEX-OXRK-1226-SM-HLJR8 50-59 years, female 63.1
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 62.1
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 61.9
GTEX-WL46-1726-SM-HAUZC 50-59 years, male 61.9
GTEX-Y3IK-0326-SM-HLJRD 50-59 years, female 61.3
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 60.8
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 60.4
GTEX-S7SE-1326-SM-HLJRN 50-59 years, male 60.4
GTEX-14BIL-1326-SM-5O9CZ 50-59 years, male 60.2
GTEX-18A7A-1526-SM-72D69 50-59 years, female 60.1
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 59.5
GTEX-18465-1626-SM-7LG6N 50-59 years, male 59.4
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 59.2
GTEX-RN64-1826-SM-48FDV 50-59 years, male 59.1
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 58.8
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 58.6
GTEX-1399T-0826-SM-5IFES 60-69 years, male 58.5
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 58.2
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 58.2
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 58.1
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 58.0
GTEX-1RQED-0726-SM-HLJQL 60-69 years, male 58.0
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 58.0
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 57.1
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 56.8
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 56.8
GTEX-W5X1-0126-SM-HLJRF 40-49 years, female 55.6
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 55.4
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 55.3
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 54.2
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 54.0
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 53.7
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 53.7
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 53.7
GTEX-13S7M-1126-SM-HAV2A 60-69 years, female 53.6
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 53.6
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 52.6
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 52.4
GTEX-WWYW-1026-SM-GQ1CM 50-59 years, female 52.4
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 51.3
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 51.1
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 50.2
GTEX-11ZUS-2526-SM-59872 30-39 years, male 49.8
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 49.8
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 49.0
GTEX-1HCU6-2026-SM-GA91U 60-69 years, female 48.8
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 48.7
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 48.6
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 48.2
GTEX-1H1CY-1026-SM-HLJS4 60-69 years, female 47.9
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 47.7
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 47.3
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 46.7
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 46.3
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 46.1
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 46.1
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 45.8
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 45.8
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 45.5
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 45.3
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 45.3
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 44.4
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 43.2
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 43.0
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 42.3
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 41.9
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 41.7
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 41.5
GTEX-1B933-1226-SM-731DW 50-59 years, female 40.9
GTEX-17HHE-0126-SM-79398 50-59 years, male 40.7
GTEX-13112-1426-SM-5EGH8 50-59 years, male 40.5
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 40.5
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 40.0
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 38.9
GTEX-144GL-1426-SM-5O9BO 50-59 years, male 38.1
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 36.9
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 34.8
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 34.7
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 32.8
GTEX-16YQH-1126-SM-HAV2D 30-39 years, male 32.5
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 32.3
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 31.7
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 29.9
Show allShow less

LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

63.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 63.2
FF:10018-101C9 64,69,70 years, mixed 63.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo