We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ATP5F1D
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • ATP5F1D
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:138.1 nTPM
GTEx:224.6 nTPM
FANTOM5:364.3 Scaled Tags Per Million
Pig:333.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

138.1
Sample id Sample description nTPM
Putamen
nTPM: 138.1
2466 Female, age 79, unknown 151.8
2647 Male, age 75, left hemisphere 146.8
2482 Female, age 94, left hemisphere 145.0
2489 Female, age 72, unknown 140.4
1937 Female, age 91, right hemisphere 137.8
1829 Male, age 74, unknown 126.2
1838 Male, age 80, right hemisphere 118.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

224.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 224.6
Samples: 254

Max nTPM: 476.7
Min nTPM: 63.7
Std nTPM: 58.7
Median nTPM: 225.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 476.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 427.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 411.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 381.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 369.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 353.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 335.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 334.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 334.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 332.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 328.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 326.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 325.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 324.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 321.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 318.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 311.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 306.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 306.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 306.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 300.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 297.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 296.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 296.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 294.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 292.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 292.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 291.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 288.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 288.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 288.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 287.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 285.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 285.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 284.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 284.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 283.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 282.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 282.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 281.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 281.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 279.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 277.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 276.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 272.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 272.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 272.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 271.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 270.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 269.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 267.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 267.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 267.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 265.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 264.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 264.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 263.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 262.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 262.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 261.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 261.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 260.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 259.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 259.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 258.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 258.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 258.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 258.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 257.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 257.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 256.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 255.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 254.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 254.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 253.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 251.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 250.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 250.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 249.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 247.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 247.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 246.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 246.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 245.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 245.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 244.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 244.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 244.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 242.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 241.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 241.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 240.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 239.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 239.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 239.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 238.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 238.6
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 237.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 237.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 237.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 236.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 236.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 236.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 236.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 235.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 235.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 235.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 234.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 234.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 233.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 233.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 233.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 233.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 232.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 232.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 232.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 232.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 231.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 231.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 229.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 229.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 229.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 229.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 228.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 227.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 226.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 225.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 224.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 224.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 224.2
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 223.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 223.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 222.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 222.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 222.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 221.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 221.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 220.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 220.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 220.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 218.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 217.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 216.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 216.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 214.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 213.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 213.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 211.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 210.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 209.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 208.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 207.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 207.4
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 206.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 206.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 205.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 205.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 205.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 204.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 204.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 203.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 202.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 201.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 199.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 198.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 196.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 193.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 192.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 191.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 191.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 190.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 189.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 189.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 189.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 189.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 189.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 188.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 187.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 187.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 187.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 186.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 186.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 185.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 185.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 185.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 182.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 182.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 181.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 180.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 180.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 180.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 179.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 178.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 178.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 177.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 177.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 176.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 175.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 174.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 174.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 172.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 172.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 171.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 171.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 171.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 169.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 169.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 169.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 168.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 168.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 167.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 167.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 167.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 167.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 167.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 166.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 164.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 164.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 163.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 163.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 163.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 163.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 162.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 161.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 161.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 161.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 159.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 159.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 159.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 158.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 157.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 157.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 156.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 155.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 153.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 153.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 151.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 147.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 146.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 143.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 140.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 137.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 136.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 135.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 131.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 130.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 129.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 124.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 122.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 118.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 114.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 95.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 77.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 63.7
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

364.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 364.3
FF:10176-103C5 60 years, female 364.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

333.7
Pig sample Sample description nTPM
Putamen
nTPM: 333.7
Samples: 4

Max nTPM: 458.1
Min nTPM: 247.6
Sample A Female 247.6
Sample B Female 283.8
Sample C Male 458.1
Sample D Male 345.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo