HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:854.9 nTPM
HPA Brain:625.2 nTPM
GTEx:854.9 nTPM
FANTOM5:705.5 Scaled Tags Per Million
Mouse:0.3 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008819Antibody CAB013493Antibody CAB080063
Glial cells HighMediumMedium
Neuronal cells LowHighMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 625.2
Sample id Sample description nTPM
Hippocampus
nTPM: 545.6
1898 Male, age 80, left hemisphere 688.2
2529 Female, age 94, left hemisphere 592.7
1911 Female, age 85, right hemisphere 511.3
2621 Female, age 67, right hemisphere 501.5
2148 Female, age 91, left hemisphere 501.3
1855 Male, age 76, left hemisphere 478.8
Dentate gyrus
nTPM: 559.8
2530 Female, age 94, left hemisphere 656.5
2528 Male, age 74, both hemispheres 624.5
1927 Female, age 91, both hemispheres 619.9
2010 Male, age 76, both hemispheres 570.1
2246 Female, age 85, both hemispheres 493.8
2531 Female, age 67, both hemispheres 393.7
Entorhinal gyrus
nTPM: 539.8
2764 Male, age 80, right hemisphere 657.0
1938 Female, age 85, left hemisphere 633.3
2117 Female, age 91, right hemisphere 574.2
1787 Male, age 76, left hemisphere 509.4
2613 Female, age 94, left hemisphere 481.8
2686 Male, age 75, right hemisphere 383.2
Hippocampus, CA1
nTPM: 625.2
2749 Male, age 80, left hemisphere 987.3
2527 Male, age 74, both hemispheres 604.6
1873 Female, age 85, both hemispheres 604.1
2082 Female, age 91, right hemisphere 501.3
2045 Male, age 76, both hemispheres 428.8
Hippocampus, CA2
nTPM: 593.6
1963 Male, age 80, left hemisphere 723.3
2249 Male, age 74, both hemispheres 702.7
1892 Male, age 76, both hemispheres 611.9
2113 Female, age 91, right hemisphere 517.0
2437 Female, age 94, left hemisphere 503.7
1940 Female, age 85, left hemisphere 503.0
Hippocampus, CA3
nTPM: 562.4
2137 Male, age 80, left hemisphere 746.3
2436 Male, age 74, both hemispheres 682.2
1867 Male, age 76, both hemispheres 535.8
2620 Female, age 94, left hemisphere 521.2
1891 Female, age 85, both hemispheres 511.3
2861 Female, age 67, both hemispheres 377.7
Parahippocampal cortex
nTPM: 514.0
1850 Male, age 80, both hemispheres 634.6
1990 Female, age 91, right hemisphere 580.6
1933 Female, age 85, both hemispheres 580.4
2250 Female, age 67, right hemisphere 548.4
2245 Female, age 91, both hemispheres 547.4
2532 Female, age 72, left hemisphere 501.3
2018 Male, age 76, both hemispheres 495.1
2692 Male, age 74, both hemispheres 443.0
2693 Female, age 94, both hemispheres 418.3
2622 Female, age 67, right hemisphere 391.0
Perirhinal gyrus
nTPM: 584.0
1794 Male, age 80, right hemisphere 684.4
1847 Female, age 91, left hemisphere 675.9
1841 Female, age 85, right hemisphere 610.1
2521 Female, age 94, right hemisphere 484.2
2848 Male, age 76, right hemisphere 465.3
Subiculum
nTPM: 537.3
1901 Male, age 80, both hemispheres 601.2
1977 Female, age 85, both hemispheres 600.4
2042 Male, age 76, both hemispheres 535.8
2729 Female, age 91, right hemisphere 518.4
2619 Male, age 74, both hemispheres 512.5
2438 Female, age 94, left hemisphere 455.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 854.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 854.9
Samples: 255

Max nTPM: 1650.8
Min nTPM: 430.1
Std nTPM: 189.8
Median nTPM: 843.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1650.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1454.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 1335.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1330.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1293.7
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 1269.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1258.2
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 1254.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 1236.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1236.0
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 1227.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 705.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 705.5
FF:10169-103B7 60 years, female 900.4
FF:10153-102I9 76 years, female 510.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Male 0.2
Sample B Male 0.3
Sample C Female 0.0
Sample D Female 0.2
Hippocampal formation
nTPM: 0.3
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.2
Sample A Male 0.2
Sample B Male 0.4
Sample C Female 0.2
Sample D Female 0.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71919523 Antisense, RP_051012_02_E12, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo