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  • TISSUE

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  • EBF4
TISSUE PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:15.2 nTPM
GTEx:10.3 nTPM
FANTOM5:5.6 Scaled Tags Per Million
Pig:3.4 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.2
Sample id Sample description nTPM
Putamen
nTPM: 15.2
1829 Male, age 74, unknown 20.0
2489 Female, age 72, unknown 18.4
2647 Male, age 75, left hemisphere 17.6
2466 Female, age 79, unknown 13.7
1838 Male, age 80, right hemisphere 12.6
2482 Female, age 94, left hemisphere 12.2
1937 Female, age 91, right hemisphere 11.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 10.3
Samples: 254

Max nTPM: 29.8
Min nTPM: 2.8
Std nTPM: 4.3
Median nTPM: 9.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 29.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 27.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 25.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 24.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 24.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 24.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 22.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 21.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 20.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 19.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 18.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 18.5
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 18.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 17.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 17.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 16.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 16.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 16.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 16.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 16.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 16.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 16.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 15.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 15.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 15.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 15.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 15.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 15.2
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 15.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 15.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 14.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 14.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 14.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 14.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 14.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 14.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 14.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 14.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 14.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 14.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 13.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 13.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 13.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 13.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 13.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 13.6
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 13.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 13.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 13.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 13.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 13.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 13.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 12.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 12.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 12.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 12.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 12.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 12.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 12.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 12.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 12.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 12.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 12.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 12.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 12.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 12.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 12.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 12.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 12.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 12.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 12.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 11.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 11.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 11.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 11.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 11.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 11.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 11.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 11.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 11.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 11.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 11.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 11.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 11.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 11.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 11.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 11.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 11.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 11.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 11.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 11.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 11.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 11.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 11.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 11.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 11.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 10.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 10.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 10.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 10.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 10.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 10.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 10.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 10.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 10.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 10.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 10.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 10.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 10.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 10.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 10.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 10.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 10.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 10.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 10.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 10.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 10.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 10.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 10.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 10.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 10.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 9.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 9.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 9.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 9.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 9.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 9.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 9.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 9.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 9.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 9.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 9.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 9.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 9.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 9.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 9.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 9.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 9.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 9.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 9.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 9.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 8.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 8.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 8.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 8.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 8.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 8.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 8.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 8.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 8.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 8.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 8.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 8.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 8.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 8.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 8.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 8.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 8.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 8.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 8.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 8.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 8.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 8.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 8.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 8.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 8.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 8.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 8.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 7.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 7.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 7.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 7.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 7.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 7.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 7.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 7.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 7.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 7.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 7.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 7.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 7.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 7.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 7.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 7.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 7.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 7.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 7.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 7.3
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 7.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 7.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 7.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 7.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 7.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 7.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 7.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 7.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 7.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 7.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 7.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 7.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 7.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 7.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 7.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 6.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 6.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 6.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 6.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 6.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 6.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 6.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 6.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 6.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 6.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 6.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 6.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 6.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 6.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 6.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 6.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 6.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 6.1
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 6.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 6.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 5.9
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 5.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 5.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 5.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 5.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 5.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 5.7
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 5.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 5.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 5.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 5.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 5.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 5.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 5.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 5.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 5.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 5.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 5.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 4.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 4.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 4.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 4.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 4.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 3.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 3.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 3.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 3.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 3.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 3.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 2.8
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

5.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 5.6
FF:10176-103C5 60 years, female 5.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.4
Pig sample Sample description nTPM
Putamen
nTPM: 3.4
Samples: 4

Max nTPM: 6.2
Min nTPM: 2.0
Sample A Female 6.2
Sample B Female 2.0
Sample C Male 2.2
Sample D Male 3.2

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