We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MAP2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • MAP2
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:304.2 nTPM
GTEx:85.9 nTPM
FANTOM5:1397.4 Scaled Tags Per Million
Pig:452.6 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

304.2
Sample id Sample description nTPM
Putamen
nTPM: 304.2
1937 Female, age 91, right hemisphere 472.4
1838 Male, age 80, right hemisphere 457.6
1829 Male, age 74, unknown 318.7
2466 Female, age 79, unknown 272.6
2482 Female, age 94, left hemisphere 212.5
2647 Male, age 75, left hemisphere 211.7
2489 Female, age 72, unknown 183.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 85.9
Samples: 254

Max nTPM: 273.6
Min nTPM: 12.6
Std nTPM: 48.8
Median nTPM: 80.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 273.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 223.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 207.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 194.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 193.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 189.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 188.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 187.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 182.8
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 180.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 178.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 176.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 173.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 172.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 170.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 168.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 168.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 165.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 165.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 163.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 163.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 163.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 160.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 154.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 153.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 151.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 151.6
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 147.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 147.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 146.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 145.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 145.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 145.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 145.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 143.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 142.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 142.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 141.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 141.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 140.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 139.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 139.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 139.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 137.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 136.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 133.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 132.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 131.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 131.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 131.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 131.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 131.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 130.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 129.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 127.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 126.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 126.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 124.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 123.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 123.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 123.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 122.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 122.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 121.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 119.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 119.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 119.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 118.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 117.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 117.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 116.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 115.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 115.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 114.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 112.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 112.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 111.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 111.9
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 111.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 110.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 110.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 109.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 109.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 107.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 103.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 102.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 101.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 101.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 101.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 99.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 99.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 98.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 98.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 97.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 96.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 96.0
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 95.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 95.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 94.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 93.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 93.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 92.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 91.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 91.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 89.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 89.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 88.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 88.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 87.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 87.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 86.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 86.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 85.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 85.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 85.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 85.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 84.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 83.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 82.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 82.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 82.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 82.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 81.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 80.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 80.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 80.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 80.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 80.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 79.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 78.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 78.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 77.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 77.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 77.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 76.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 76.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 76.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 75.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 75.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 74.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 74.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 73.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 73.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 72.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 71.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 71.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 70.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 70.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 69.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 68.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 68.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 68.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 67.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 67.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 66.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 64.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 60.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 60.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 59.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 59.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 59.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 58.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 58.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 57.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 57.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 57.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 56.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 56.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 56.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 55.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 54.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 54.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 54.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 53.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 53.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 53.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 53.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 53.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 53.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 51.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 51.4
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 50.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 48.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 47.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 47.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 47.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 46.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 46.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 46.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 45.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 45.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 45.8
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 44.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 44.1
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 43.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 42.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 40.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 39.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 39.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 38.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 38.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 37.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 35.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 35.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 35.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 35.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 34.8
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 34.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 33.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 33.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 33.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 33.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 32.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 32.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 32.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 32.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 31.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 31.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 31.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 31.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 31.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 31.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 30.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 30.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 29.1
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 28.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 27.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 27.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 27.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 27.1
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 26.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 26.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 25.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 25.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 24.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 24.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 23.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 23.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 23.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 22.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 22.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 22.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 21.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 20.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 20.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 20.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 20.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 18.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 18.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 18.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 16.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 16.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 15.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 12.6
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1397.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1397.4
FF:10176-103C5 60 years, female 1397.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

452.6
Pig sample Sample description nTPM
Putamen
nTPM: 452.6
Samples: 4

Max nTPM: 717.1
Min nTPM: 293.9
Sample A Female 293.9
Sample B Female 408.9
Sample C Male 717.1
Sample D Male 390.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo