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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
40.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 40.2
Samples: 105
Max nTPM: 75.5
Min nTPM: 20.4
Std nTPM: 11.3
Median nTPM:
490_1
67 years, female
75.5
491_1
89 years, female
71.1
149_1
88 years, male
67.4
466_1
57 years, female
67.0
495_1
57 years, female
63.6
32_1
67 years, male
59.5
415_1
77 years, female
58.1
89_1
63 years, male
57.7
413_1
59 years, female
57.0
43_1
64 years, female
56.7
217_1
76 years, male
55.7
501_1
88 years, male
55.4
162_1
79 years, female
55.3
81_1
67 years, male
54.8
126_1
63 years, male
53.1
139_1
64 years, female
53.0
35_1
74 years, female
51.0
2_1
77 years, female
50.5
18_1
88 years, male
50.2
9_1
66 years, female
49.4
315_1
62 years, female
49.0
468_1
89 years, male
48.8
142_1
61 years, female
48.2
518_1
75 years, female
47.1
137_1
83 years, male
46.4
145_1
84 years, male
46.3
117_1
61 years, male
46.1
17_1
71 years, male
45.7
6_1
73 years, female
45.5
153_1
70 years, female
45.3
499_1
55 years, female
45.3
526_1
61 years, male
45.2
42_1
85 years, male
45.0
251_1
78 years, male
44.7
311_1
78 years, male
44.5
119_1
70 years, female
44.3
314_1
67 years, male
44.3
109_1
81 years, female
43.9
414_1
84 years, female
43.6
115_1
83 years, male
42.7
4_1
88 years, female
42.6
307_1
66 years, female
41.8
254_1
77 years, female
41.3
324_1
76 years, male
41.2
348_1
84 years, male
41.0
313_1
79 years, female
40.2
120_1
70 years, female
40.0
266_1
85 years, male
40.0
308_1
70 years, female
40.0
480_1
63 years, male
40.0
288_1
66 years, female
39.8
246_1
77 years, male
39.7
316_1
62 years, male
39.7
265_1
87 years, male
39.6
322_1
76 years, male
39.3
396_1
62 years, male
39.3
503_1
68 years, male
38.9
292_1
71 years, male
38.5
99_1
64 years, male
38.2
389_1
86 years, female
37.0
291_1
76 years, male
35.8
405_1
91 years, male
35.8
229_1
69 years, female
35.5
447_1
81 years, male
35.3
517_1
88 years, male
35.1
355_1
70 years, female
34.9
347_1
72 years, male
34.3
335_1
73 years, female
34.0
293_1
68 years, female
33.8
320_1
89 years, female
33.6
406_1
79 years, male
33.2
425_1
59 years, female
33.0
41_1
94 years, female
32.6
375_1
74 years, female
32.6
386_1
76 years, male
32.5
377_1
82 years, female
32.4
321_1
62 years, female
31.4
351_1
91 years, male
31.0
243_1
75 years, male
30.1
173_1
67 years, male
30.0
352_1
62 years, male
30.0
286_1
68 years, female
29.9
237_1
82 years, male
29.7
350_1
84 years, female
29.7
264_1
73 years, female
29.6
295_1
61 years, female
29.3
189_1
76 years, male
29.1
318_1
68 years, male
29.0
319_1
81 years, male
29.0
376_1
75 years, female
29.0
353_1
82 years, female
28.9
172_1
72 years, female
28.5
384_1
83 years, male
28.5
506_1
65 years, male
28.0
404_1
82 years, female
27.9
349_1
83 years, male
27.6
317_1
60 years, male
27.1
354_1
81 years, female
26.9
356_1
87 years, female
26.1
379_1
60 years, male
25.8
394_1
75 years, female
25.6
177_1
74 years, male
23.6
452_1
88 years, female
21.4
163_1
78 years, male
20.8
218_1
71 years, female
20.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
