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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
184.1
nTPM
HPA Brain:
197.3
nTPM
GTEx:
184.1
nTPM
FANTOM5:
346.6
Scaled Tags Per Million
Pig:
347.1
nTPM
Mouse:
297.4
nTPM
Allen mouse:
12.9
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
197.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 150.8
1833
Male, age 53, unknown
174.8
1870
Female, age 42, unknown
164.3
2019
Male, age 18, unknown
163.6
1830
Male, age 51, unknown
161.6
2828
Female, age 72, unknown
160.5
2219
Male, age 76, both hemispheres
160.4
1827
Male, age 72, unknown
155.6
2411
Female, age 72, unknown
142.8
2666
Male, age 74, left hemisphere
130.7
2586
Male, age 75, left hemisphere
93.8
Dorsal raphe nucleus nTPM: 163.0
2750
Male, age 76, both hemispheres
185.3
1828
Male, age 53, unknown
169.2
2047
Male, age 72, unknown
167.5
2016
Female, age 72, unknown
146.7
2298
Female, age 72, unknown
146.4
Inferior colliculus nTPM: 144.2
2097
Female, age 72, unknown
153.4
2849
Male, age 72, unknown
143.4
1890
Male, age 53, unknown
142.1
1848
Female, age 42, unknown
138.0
Median raphe nucleus nTPM: 197.3
2220
Male, age 76, midline
197.3
Periaquaductal grey, anterior nTPM: 152.0
1947
Male, age 18, unknown
166.6
2502
Female, age 75, unknown
153.9
1795
Male, age 51, unknown
135.6
Periaquaductal grey, dorsal nTPM: 166.7
2850
Male, age 76, both hemispheres
217.2
2464
Female, age 72, unknown
163.2
1831
Male, age 72, unknown
148.2
1840
Male, age 53, unknown
138.3
Periaquaductal grey, lateral nTPM: 193.6
2272
Male, age 74, both hemispheres
232.8
2140
Male, age 76, both hemispheres
182.3
2053
Male, age 18, unknown
165.8
Pretectal area nTPM: 175.2
2273
Male, age 74, both hemispheres
206.9
1817
Female, age 42, unknown
191.1
1815
Male, age 53, unknown
188.4
2667
Female, age 75, unknown
186.8
1944
Female, age 72, unknown
173.8
2407
Male, age 75, both hemispheres
173.4
2007
Male, age 72, unknown
171.5
1816
Male, age 51, unknown
171.4
2224
Female, age 72, unknown
163.4
2316
Male, age 76, right hemisphere
156.1
2825
Male, age 18, unknown
144.0
Red nucleus nTPM: 161.6
1821
Female, age 72, unknown
195.5
2823
Male, age 76, right hemisphere
191.6
1865
Male, age 51, unknown
181.1
2725
Female, age 75, unknown
178.4
1954
Female, age 42, unknown
176.6
1904
Male, age 53, unknown
163.1
2785
Male, age 18, unknown
159.7
2227
Male, age 72, unknown
156.7
2769
Male, age 72, unknown
151.7
2503
Female, age 72, unknown
146.8
2584
Male, age 75, left hemisphere
133.5
2588
Male, age 74, left hemisphere
104.3
Substantia nigra nTPM: 178.9
1916
Female, age 42, unknown
234.7
1851
Male, age 51, unknown
196.6
2699
Male, age 18, unknown
191.7
2409
Female, age 72, unknown
191.5
2241
Male, age 72, unknown
189.8
1941
Male, age 53, unknown
186.1
1889
Female, age 72, unknown
180.7
2590
Female, age 75, unknown
144.9
2665
Male, age 74, both hemispheres
137.5
2583
Male, age 75, right hemisphere
135.6
Superior colliculus nTPM: 152.1
2587
Male, age 74, left hemisphere
176.9
2087
Female, age 72, unknown
164.7
2261
Male, age 18, unknown
160.8
1995
Male, age 72, unknown
157.8
1913
Female, age 42, unknown
156.6
1895
Male, age 76, right hemisphere
154.4
2668
Female, age 75, unknown
151.1
1796
Male, age 53, unknown
146.6
1839
Male, age 51, unknown
144.8
2664
Male, age 75, both hemispheres
107.9
Ventral tegmental area nTPM: 175.7
2218
Male, age 76, both hemispheres
199.3
2410
Female, age 72, unknown
191.2
1915
Female, age 42, unknown
189.3
2223
Female, age 72, unknown
171.9
2021
Male, age 53, unknown
151.8
1942
Male, age 51, unknown
150.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
184.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 184.1
Samples: 139
Max nTPM: 307.8
Min nTPM: 128.0
Std nTPM: 27.8
Median nTPM: 177.1
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
307.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
284.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
250.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
235.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
235.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
234.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
232.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
231.9
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
227.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
221.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
221.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
221.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
220.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
217.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
217.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
217.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
216.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
215.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
215.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
214.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
214.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
212.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
211.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
210.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
210.0
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
209.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
209.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
208.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
208.4
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
206.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
201.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
201.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
200.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
200.3
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
199.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
198.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
196.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
196.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
195.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
195.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
194.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
194.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
194.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
194.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
194.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
193.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
193.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
191.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
191.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
191.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
191.2
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
190.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
190.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
190.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
188.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
186.6
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
186.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
186.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
185.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
184.3
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
184.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
183.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
183.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
183.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
183.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
182.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
181.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
178.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
178.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
177.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
177.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
177.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
176.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
176.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
176.5
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
175.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
175.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
175.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
175.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
175.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
174.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
174.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
173.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
173.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
173.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
172.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
172.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
172.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
172.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
171.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
171.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
171.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
171.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
170.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
170.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
169.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
168.5
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
168.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
168.3
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
168.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
168.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
167.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
167.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
166.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
165.4
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
165.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
164.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
164.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
164.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
162.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
162.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
161.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
161.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
160.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
160.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
160.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
158.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
158.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
158.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
158.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
156.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
155.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
155.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
153.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
152.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
151.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
151.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
151.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
151.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
150.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
150.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
148.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
146.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
143.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
141.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
137.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
135.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
130.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
128.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
297.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 297.4
Samples: 4
Max nTPM: 300.9
Min nTPM: 293.6
Sample A
Male
298.7
Sample B
Male
293.6
Sample C
Female
296.4
Sample D
Female
300.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.