COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: Low
RNA expressioni
Consensus:22.6 nTPM
HPA:15.5 nTPM
GTEx:22.6 nTPM
FANTOM5:7.7 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION

COLON - Antibody stainingi
Antibody HPA037700Antibody HPA037701
Endothelial cells MediumMedium
Glandular cells MediumHigh
Peripheral nerve/ganglion MediumLow


COLON - HPA RNA-seqi
Average nTPMi 15.5
overview
Male, age 54
Colon sample 67
nTPM: 10.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 12.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 18.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 10.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 15.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 18.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 17.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 17.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 13.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 18.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 15.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 16.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 18.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 22.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 20.8
Samples: 419

Max nTPM: 36.2
Min nTPM: 7.7
Std nTPM: 5.2
Median nTPM: 20.1
GTEX-1KD4Q-2626-SM-HLJQP 40-49 years, male 36.2
GTEX-1A8G7-2326-SM-GNTBA 60-69 years, male 35.5
GTEX-1PIIG-2126-SM-EXUSD 30-39 years, male 35.2
GTEX-14BIL-2726-SM-GRR1V 50-59 years, male 34.9
GTEX-WHSB-1126-SM-GMXAL 50-59 years, male 34.7
GTEX-13OW7-2326-SM-GI4WL 50-59 years, male 34.6
GTEX-Y8LW-1126-SM-4VDS4 50-59 years, female 34.5
GTEX-1NV8Z-2526-SM-F648C 60-69 years, male 34.4
GTEX-1M4P7-2226-SM-GPI9V 60-69 years, male 34.3
GTEX-1LSNL-1626-SM-E9TJY 50-59 years, male 34.2
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 33.4
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Colon - Transverse
Average nTPM: 22.6
Samples: 479

Max nTPM: 57.0
Min nTPM: 7.5
Std nTPM: 6.0
Median nTPM: 22.2
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 57.0
GTEX-1HBPN-1826-SM-GA91G 50-59 years, male 51.8
GTEX-WOFL-2626-SM-F21IV 60-69 years, male 51.7
GTEX-YEC3-2426-SM-DO11A 50-59 years, male 46.4
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 45.0
GTEX-1IDJI-2326-SM-GA918 50-59 years, female 44.1
GTEX-132QS-1726-SM-GHWP6 60-69 years, male 40.8
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 39.1
GTEX-1H1DG-2226-SM-9WPPC 70-79 years, male 38.3
GTEX-QEG5-2226-SM-GQ1CD 20-29 years, male 37.4
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 35.9
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 7.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 7.7
FF:10014-101C5 62,83,84 years, mixed 7.7

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