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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
21.6
nTPM
GTEx:
21.6
nTPM
FANTOM5:
15.9
Scaled Tags Per Million
Pig:
19.7
nTPM
Mouse:
1.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
21.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 21.6
Samples: 105
Max nTPM: 38.8
Min nTPM: 12.9
Std nTPM: 4.9
Median nTPM:
218_1
71 years, female
38.8
237_1
82 years, male
34.3
379_1
60 years, male
32.3
355_1
70 years, female
31.8
354_1
81 years, female
31.1
347_1
72 years, male
30.5
375_1
74 years, female
30.5
447_1
81 years, male
30.5
386_1
76 years, male
30.4
405_1
91 years, male
28.8
490_1
67 years, female
28.6
350_1
84 years, female
28.3
35_1
74 years, female
28.1
308_1
70 years, female
28.0
172_1
72 years, female
27.8
266_1
85 years, male
27.4
307_1
66 years, female
27.3
243_1
75 years, male
26.6
335_1
73 years, female
25.9
6_1
73 years, female
25.5
322_1
76 years, male
25.5
352_1
62 years, male
25.3
495_1
57 years, female
25.2
313_1
79 years, female
25.1
353_1
82 years, female
25.0
43_1
64 years, female
24.3
162_1
79 years, female
24.2
117_1
61 years, male
24.1
229_1
69 years, female
23.7
324_1
76 years, male
23.4
389_1
86 years, female
23.4
491_1
89 years, female
23.4
319_1
81 years, male
23.2
311_1
78 years, male
23.1
396_1
62 years, male
22.9
42_1
85 years, male
22.8
99_1
64 years, male
22.8
142_1
61 years, female
22.5
286_1
68 years, female
22.5
316_1
62 years, male
22.2
356_1
87 years, female
22.2
499_1
55 years, female
22.1
466_1
57 years, female
22.0
292_1
71 years, male
21.5
315_1
62 years, female
21.5
41_1
94 years, female
21.3
177_1
74 years, male
21.3
163_1
78 years, male
21.1
318_1
68 years, male
21.0
394_1
75 years, female
20.9
468_1
89 years, male
20.9
120_1
70 years, female
20.8
452_1
88 years, female
20.7
348_1
84 years, male
20.6
291_1
76 years, male
20.5
404_1
82 years, female
20.3
317_1
60 years, male
20.1
414_1
84 years, female
20.1
137_1
83 years, male
20.0
503_1
68 years, male
20.0
189_1
76 years, male
19.9
480_1
63 years, male
19.9
518_1
75 years, female
19.9
406_1
79 years, male
19.8
139_1
64 years, female
19.7
377_1
82 years, female
19.7
349_1
83 years, male
19.6
415_1
77 years, female
19.6
425_1
59 years, female
19.6
376_1
75 years, female
19.5
119_1
70 years, female
19.4
32_1
67 years, male
19.1
264_1
73 years, female
19.0
320_1
89 years, female
18.9
18_1
88 years, male
18.8
217_1
76 years, male
18.8
384_1
83 years, male
18.7
288_1
66 years, female
18.6
17_1
71 years, male
18.5
173_1
67 years, male
18.3
149_1
88 years, male
18.2
526_1
61 years, male
18.0
153_1
70 years, female
17.9
246_1
77 years, male
17.9
351_1
91 years, male
17.7
9_1
66 years, female
17.4
126_1
63 years, male
17.3
145_1
84 years, male
17.2
2_1
77 years, female
17.1
321_1
62 years, female
17.1
506_1
65 years, male
16.9
4_1
88 years, female
16.2
109_1
81 years, female
15.8
115_1
83 years, male
15.6
251_1
78 years, male
15.3
295_1
61 years, female
15.2
254_1
77 years, female
15.1
81_1
67 years, male
15.0
265_1
87 years, male
14.9
501_1
88 years, male
14.9
517_1
88 years, male
14.3
293_1
68 years, female
14.0
314_1
67 years, male
13.7
413_1
59 years, female
13.1
89_1
63 years, male
12.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
