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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
75.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 75.3
Samples: 105
Max nTPM: 141.9
Min nTPM: 31.2
Std nTPM: 20.4
Median nTPM:
218_1
71 years, female
141.9
308_1
70 years, female
127.1
447_1
81 years, male
110.6
384_1
83 years, male
109.2
163_1
78 years, male
106.3
295_1
61 years, female
103.8
321_1
62 years, female
102.6
386_1
76 years, male
102.0
173_1
67 years, male
101.8
495_1
57 years, female
101.6
404_1
82 years, female
101.5
316_1
62 years, male
100.6
41_1
94 years, female
97.4
137_1
83 years, male
95.9
177_1
74 years, male
94.9
319_1
81 years, male
94.6
406_1
79 years, male
94.6
322_1
76 years, male
92.3
251_1
78 years, male
91.9
347_1
72 years, male
91.9
379_1
60 years, male
91.4
425_1
59 years, female
90.0
172_1
72 years, female
89.9
17_1
71 years, male
89.5
351_1
91 years, male
89.2
237_1
82 years, male
89.0
352_1
62 years, male
88.9
229_1
69 years, female
88.8
350_1
84 years, female
88.5
353_1
82 years, female
87.8
354_1
81 years, female
87.6
389_1
86 years, female
87.6
6_1
73 years, female
86.7
348_1
84 years, male
86.3
452_1
88 years, female
86.2
396_1
62 years, male
85.9
405_1
91 years, male
84.7
375_1
74 years, female
83.7
349_1
83 years, male
83.5
291_1
76 years, male
83.4
243_1
75 years, male
83.0
317_1
60 years, male
82.6
320_1
89 years, female
81.2
35_1
74 years, female
81.1
377_1
82 years, female
80.9
376_1
75 years, female
79.2
506_1
65 years, male
78.5
335_1
73 years, female
76.7
145_1
84 years, male
76.6
355_1
70 years, female
76.4
286_1
68 years, female
76.2
526_1
61 years, male
75.8
480_1
63 years, male
75.4
292_1
71 years, male
75.3
2_1
77 years, female
75.2
266_1
85 years, male
75.2
307_1
66 years, female
74.2
246_1
77 years, male
73.7
254_1
77 years, female
72.6
356_1
87 years, female
72.6
318_1
68 years, male
72.4
518_1
75 years, female
72.0
517_1
88 years, male
71.8
189_1
76 years, male
70.8
315_1
62 years, female
70.3
120_1
70 years, female
69.7
264_1
73 years, female
69.6
394_1
75 years, female
69.6
311_1
78 years, male
69.5
115_1
83 years, male
69.4
265_1
87 years, male
69.0
4_1
88 years, female
66.7
314_1
67 years, male
65.7
324_1
76 years, male
64.7
153_1
70 years, female
64.3
217_1
76 years, male
64.0
468_1
89 years, male
63.8
293_1
68 years, female
63.3
99_1
64 years, male
61.6
139_1
64 years, female
61.4
126_1
63 years, male
60.3
288_1
66 years, female
60.0
18_1
88 years, male
59.9
503_1
68 years, male
59.7
9_1
66 years, female
58.9
43_1
64 years, female
57.4
119_1
70 years, female
54.9
313_1
79 years, female
54.4
117_1
61 years, male
52.5
89_1
63 years, male
51.0
42_1
85 years, male
50.8
162_1
79 years, female
50.7
499_1
55 years, female
50.1
109_1
81 years, female
49.2
81_1
67 years, male
48.7
32_1
67 years, male
44.4
142_1
61 years, female
44.2
501_1
88 years, male
43.4
414_1
84 years, female
41.2
415_1
77 years, female
41.1
413_1
59 years, female
37.7
490_1
67 years, female
35.8
149_1
88 years, male
32.5
466_1
57 years, female
31.2
491_1
89 years, female
31.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
