HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:212.2 nTPM
HPA Brain:183.7 nTPM
GTEx:212.2 nTPM
FANTOM5:285.3 Scaled Tags Per Million
Pig:245.2 nTPM
Mouse:166.8 nTPM
Allen mouse:3.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB005052
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 183.7
Sample id Sample description nTPM
Hippocampus
nTPM: 183.7
1855 Male, age 76, left hemisphere 207.0
1898 Male, age 80, left hemisphere 201.3
2529 Female, age 94, left hemisphere 184.1
1911 Female, age 85, right hemisphere 182.6
2621 Female, age 67, right hemisphere 170.5
2148 Female, age 91, left hemisphere 156.7
Dentate gyrus
nTPM: 164.9
2010 Male, age 76, both hemispheres 201.2
2530 Female, age 94, left hemisphere 192.4
2246 Female, age 85, both hemispheres 165.1
2528 Male, age 74, both hemispheres 162.7
1927 Female, age 91, both hemispheres 144.7
2531 Female, age 67, both hemispheres 123.1
Entorhinal gyrus
nTPM: 158.2
2117 Female, age 91, right hemisphere 207.6
1787 Male, age 76, left hemisphere 177.3
1938 Female, age 85, left hemisphere 174.4
2764 Male, age 80, right hemisphere 145.0
2686 Male, age 75, right hemisphere 137.1
2613 Female, age 94, left hemisphere 108.0
Hippocampus, CA1
nTPM: 169.6
1873 Female, age 85, both hemispheres 178.7
2045 Male, age 76, both hemispheres 177.7
2527 Male, age 74, both hemispheres 171.3
2749 Male, age 80, left hemisphere 163.0
2082 Female, age 91, right hemisphere 157.5
Hippocampus, CA2
nTPM: 171.4
2249 Male, age 74, both hemispheres 184.9
1940 Female, age 85, left hemisphere 183.3
1963 Male, age 80, left hemisphere 170.4
1892 Male, age 76, both hemispheres 165.5
2437 Female, age 94, left hemisphere 164.8
2113 Female, age 91, right hemisphere 159.4
Hippocampus, CA3
nTPM: 152.7
1891 Female, age 85, both hemispheres 185.0
1867 Male, age 76, both hemispheres 179.5
2436 Male, age 74, both hemispheres 174.1
2137 Male, age 80, left hemisphere 143.7
2861 Female, age 67, both hemispheres 123.7
2620 Female, age 94, left hemisphere 110.4
Parahippocampal cortex
nTPM: 161.4
2018 Male, age 76, both hemispheres 201.7
1850 Male, age 80, both hemispheres 172.6
1933 Female, age 85, both hemispheres 171.1
2250 Female, age 67, right hemisphere 168.5
2692 Male, age 74, both hemispheres 166.3
1990 Female, age 91, right hemisphere 154.8
2245 Female, age 91, both hemispheres 153.8
2532 Female, age 72, left hemisphere 151.5
2693 Female, age 94, both hemispheres 141.6
2622 Female, age 67, right hemisphere 132.3
Perirhinal gyrus
nTPM: 163.4
1841 Female, age 85, right hemisphere 176.2
1794 Male, age 80, right hemisphere 162.0
2521 Female, age 94, right hemisphere 160.0
2848 Male, age 76, right hemisphere 159.5
1847 Female, age 91, left hemisphere 159.3
Subiculum
nTPM: 182.2
2042 Male, age 76, both hemispheres 217.1
2438 Female, age 94, left hemisphere 192.1
2729 Female, age 91, right hemisphere 183.7
1901 Male, age 80, both hemispheres 169.7
1977 Female, age 85, both hemispheres 166.6
2619 Male, age 74, both hemispheres 164.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 212.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 212.2
Samples: 255

Max nTPM: 391.7
Min nTPM: 133.9
Std nTPM: 47.2
Median nTPM: 201.7
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 391.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 358.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 341.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 335.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 335.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 331.9
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 331.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 326.0
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 310.4
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 309.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 301.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 285.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 285.3
FF:10153-102I9 76 years, female 368.2
FF:10169-103B7 60 years, female 202.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 245.2
Pig sample Sample description nTPM
Subiculum
nTPM: 208.2
Samples: 4

Max nTPM: 252.9
Min nTPM: 183.2
Sample A Female 252.9
Sample B Female 196.8
Sample C Male 183.2
Sample D Male 200.0
Dorsal hippocampus
nTPM: 245.2
Samples: 4

Max nTPM: 328.9
Min nTPM: 163.4
Sample A Female 328.9
Sample B Female 218.5
Sample C Male 269.9
Sample D Male 163.4
Entorhinal cortex
nTPM: 179.5
Samples: 4

Max nTPM: 196.6
Min nTPM: 144.4
Sample A Female 194.7
Sample B Female 196.6
Sample C Male 182.4
Sample D Male 144.4
Ventral hippocampus
nTPM: 217.4
Samples: 4

Max nTPM: 250.1
Min nTPM: 166.0
Sample A Female 228.0
Sample B Female 166.0
Sample C Male 250.1
Sample D Male 225.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 166.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 158.1
Samples: 4

Max nTPM: 163.7
Min nTPM: 153.0
Sample A Male 157.5
Sample B Male 153.0
Sample C Female 163.7
Sample D Female 158.2
Hippocampal formation
nTPM: 166.8
Samples: 4

Max nTPM: 179.3
Min nTPM: 160.0
Sample A Male 179.3
Sample B Male 160.0
Sample C Female 162.5
Sample D Female 165.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
73606534 Antisense, RP_051130_01_B05, Mouse strain C57BL/6J (56 days, male) 3.5

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo