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  • TISSUE

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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:398.9 nTPM
HPA Brain:589.7 nTPM
GTEx:398.9 nTPM
Pig:512.4 nTPM
Mouse:1169.0 nTPM
Allen mouse:16.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

589.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 452.1
2226 Male, age 75, left hemisphere 557.9
1961 Female, age 42, unknown 346.3
Dorsomedial nucleus
nTPM: 497.8
1989 Male, age 62, unknown 709.4
2041 Female, age 72, unknown 434.8
2017 Female, age 42, unknown 349.3
Lateral hypothalamic area
nTPM: 553.5
1791 Male, age 80, right hemisphere 664.1
2271 Male, age 75, both hemispheres 612.0
2228 Male, age 66, unknown 543.4
2412 Male, age 62, unknown 394.5
Mammillary body
nTPM: 589.7
1923 Female, age 72, unknown 767.0
2413 Male, age 66, unknown 639.9
1948 Female, age 72, unknown 537.6
1834 Female, age 42, unknown 511.3
1945 Male, age 80, right hemisphere 492.6
Paraventricular nucleus
nTPM: 372.0
2700 Male, age 62, unknown 372.0
Preoptic area
nTPM: 454.5
1861 Female, age 42, unknown 500.1
1907 Male, age 80, right hemisphere 473.5
2414 Female, age 72, unknown 389.9
Supraoptic nucleus
nTPM: 458.0
2835 Female, age 72, unknown 545.7
1894 Female, age 72, unknown 461.1
2043 Male, age 62, unknown 367.2
Ventromedial nucleus
nTPM: 391.2
1982 Female, age 72, unknown 413.3
1822 Female, age 42, unknown 369.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

398.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 398.9
Samples: 257

Max nTPM: 739.2
Min nTPM: 210.1
Std nTPM: 90.9
Median nTPM: 388.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 739.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 696.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 692.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 638.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 635.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 628.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 601.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 598.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 597.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 595.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 584.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 581.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 578.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 575.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 572.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 563.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 561.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 558.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 553.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 535.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 535.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 532.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 530.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 528.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 528.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 524.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 522.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 520.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 518.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 516.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 511.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 506.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 505.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 504.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 501.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 497.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 497.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 494.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 492.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 490.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 484.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 478.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 475.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 472.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 471.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 471.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 470.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 467.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 464.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 461.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 461.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 460.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 460.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 458.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 458.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 458.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 447.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 445.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 445.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 444.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 442.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 442.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 440.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 440.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 439.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 439.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 438.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 438.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 437.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 436.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 434.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 434.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 433.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 432.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 431.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 431.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 428.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 426.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 426.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 425.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 423.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 423.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 422.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 422.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 422.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 420.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 420.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 420.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 420.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 419.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 418.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 416.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 413.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 413.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 411.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 411.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 410.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 410.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 410.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 409.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 408.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 407.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 406.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 405.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 405.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 405.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 404.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 404.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 403.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 401.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 400.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 398.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 398.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 398.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 397.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 397.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 396.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 393.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 393.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 392.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 391.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 391.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 390.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 389.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 389.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 389.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 388.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 388.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 388.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 388.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 387.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 387.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 387.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 386.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 386.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 385.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 384.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 384.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 383.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 382.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 381.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 381.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 381.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 379.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 378.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 378.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 377.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 377.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 376.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 375.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 375.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 373.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 373.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 372.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 369.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 369.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 368.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 367.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 367.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 367.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 366.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 364.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 364.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 363.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 362.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 360.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 359.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 359.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 359.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 358.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 357.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 356.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 356.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 356.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 356.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 356.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 355.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 354.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 354.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 354.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 352.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 351.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 351.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 350.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 349.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 349.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 348.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 347.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 346.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 344.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 342.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 341.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 340.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 339.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 339.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 338.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 337.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 337.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 337.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 336.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 335.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 335.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 334.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 332.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 330.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 329.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 329.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 325.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 325.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 324.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 322.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 321.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 320.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 319.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 319.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 317.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 316.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 315.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 315.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 314.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 311.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 310.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 304.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 304.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 303.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 300.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 299.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 298.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 298.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 298.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 297.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 297.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 288.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 286.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 285.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 278.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 275.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 273.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 273.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 270.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 270.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 267.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 267.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 266.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 266.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 257.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 255.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 254.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 250.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 249.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 246.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 240.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 237.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 231.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 217.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 216.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 210.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

512.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 512.4
Samples: 4

Max nTPM: 628.6
Min nTPM: 439.8
Sample A Female 628.6
Sample B Female 512.0
Sample C Male 469.1
Sample D Male 439.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1169.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 1169.0
Samples: 4

Max nTPM: 1272.1
Min nTPM: 1118.5
Sample A Male 1162.7
Sample B Male 1272.1
Sample C Female 1118.5
Sample D Female 1122.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 16.6
68269268 Antisense, RP_041208_02_A02, Mouse strain C57BL/6J (56 days, male) 16.6

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