HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:353.7 nTPM
HPA Brain:532.5 nTPM
GTEx:353.7 nTPM
FANTOM5:841.8 Scaled Tags Per Million
Pig:714.4 nTPM
Mouse:1197.1 nTPM
Allen mouse:19.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029501Antibody CAB019421
Glial cells LowMedium
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 532.5
Sample id Sample description nTPM
Hippocampus
nTPM: 458.9
1898 Male, age 80, left hemisphere 592.5
2148 Female, age 91, left hemisphere 475.1
2621 Female, age 67, right hemisphere 469.8
1855 Male, age 76, left hemisphere 438.9
2529 Female, age 94, left hemisphere 430.7
1911 Female, age 85, right hemisphere 346.4
Dentate gyrus
nTPM: 463.8
1927 Female, age 91, both hemispheres 545.8
2010 Male, age 76, both hemispheres 479.4
2530 Female, age 94, left hemisphere 474.4
2528 Male, age 74, both hemispheres 474.3
2246 Female, age 85, both hemispheres 442.9
2531 Female, age 67, both hemispheres 366.4
Entorhinal gyrus
nTPM: 441.3
2764 Male, age 80, right hemisphere 520.8
1938 Female, age 85, left hemisphere 461.1
2613 Female, age 94, left hemisphere 455.7
1787 Male, age 76, left hemisphere 412.7
2117 Female, age 91, right hemisphere 404.7
2686 Male, age 75, right hemisphere 392.9
Hippocampus, CA1
nTPM: 490.8
2749 Male, age 80, left hemisphere 577.5
2527 Male, age 74, both hemispheres 495.6
2082 Female, age 91, right hemisphere 478.2
1873 Female, age 85, both hemispheres 472.0
2045 Male, age 76, both hemispheres 431.0
Hippocampus, CA2
nTPM: 489.2
1892 Male, age 76, both hemispheres 615.0
2249 Male, age 74, both hemispheres 590.9
1963 Male, age 80, left hemisphere 486.2
2437 Female, age 94, left hemisphere 440.8
2113 Female, age 91, right hemisphere 406.9
1940 Female, age 85, left hemisphere 395.4
Hippocampus, CA3
nTPM: 510.8
2436 Male, age 74, both hemispheres 773.5
1867 Male, age 76, both hemispheres 499.1
2620 Female, age 94, left hemisphere 491.6
2137 Male, age 80, left hemisphere 483.2
2861 Female, age 67, both hemispheres 437.1
1891 Female, age 85, both hemispheres 380.1
Parahippocampal cortex
nTPM: 448.4
1850 Male, age 80, both hemispheres 533.7
2245 Female, age 91, both hemispheres 497.1
1990 Female, age 91, right hemisphere 476.4
2250 Female, age 67, right hemisphere 464.9
2532 Female, age 72, left hemisphere 452.1
1933 Female, age 85, both hemispheres 432.0
2622 Female, age 67, right hemisphere 414.1
2018 Male, age 76, both hemispheres 411.1
2692 Male, age 74, both hemispheres 407.3
2693 Female, age 94, both hemispheres 395.2
Perirhinal gyrus
nTPM: 532.5
1847 Female, age 91, left hemisphere 655.8
1794 Male, age 80, right hemisphere 583.1
1841 Female, age 85, right hemisphere 524.5
2521 Female, age 94, right hemisphere 465.2
2848 Male, age 76, right hemisphere 433.6
Subiculum
nTPM: 417.6
2438 Female, age 94, left hemisphere 466.7
2619 Male, age 74, both hemispheres 454.8
1901 Male, age 80, both hemispheres 441.3
1977 Female, age 85, both hemispheres 419.9
2729 Female, age 91, right hemisphere 389.3
2042 Male, age 76, both hemispheres 333.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 353.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 353.7
Samples: 255

Max nTPM: 652.8
Min nTPM: 153.1
Std nTPM: 91.3
Median nTPM: 350.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 652.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 652.5
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 625.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 557.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 554.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 553.5
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 545.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 541.6
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 528.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 526.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 520.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 841.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 841.8
FF:10169-103B7 60 years, female 1158.0
FF:10153-102I9 76 years, female 525.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 714.4
Pig sample Sample description nTPM
Subiculum
nTPM: 590.8
Samples: 4

Max nTPM: 732.8
Min nTPM: 513.9
Sample A Female 732.8
Sample B Female 519.8
Sample C Male 596.8
Sample D Male 513.9
Dorsal hippocampus
nTPM: 688.1
Samples: 4

Max nTPM: 832.4
Min nTPM: 546.4
Sample A Female 832.4
Sample B Female 733.5
Sample C Male 640.0
Sample D Male 546.4
Entorhinal cortex
nTPM: 638.2
Samples: 4

Max nTPM: 703.6
Min nTPM: 578.8
Sample A Female 703.6
Sample B Female 662.7
Sample C Male 607.6
Sample D Male 578.8
Ventral hippocampus
nTPM: 714.4
Samples: 4

Max nTPM: 855.6
Min nTPM: 452.6
Sample A Female 792.2
Sample B Female 452.6
Sample C Male 855.6
Sample D Male 757.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1197.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1098.1
Samples: 4

Max nTPM: 1262.4
Min nTPM: 1021.1
Sample A Male 1021.1
Sample B Male 1056.3
Sample C Female 1052.6
Sample D Female 1262.4
Hippocampal formation
nTPM: 1197.1
Samples: 4

Max nTPM: 1335.4
Min nTPM: 1103.8
Sample A Male 1103.8
Sample B Male 1170.8
Sample C Female 1335.4
Sample D Female 1178.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 19.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.6
68269268 Antisense, RP_041208_02_A02, Mouse strain C57BL/6J (56 days, male) 19.6

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