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  • YBX1
TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:275.5 nTPM
HPA:241.7 nTPM
GTEx:275.5 nTPM
FANTOM5:66.3 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA040304Antibody HPA057159Antibody CAB005875
Follicle cells -High-
Ovarian stroma cells MediumNot detectedLow






OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

241.7
overview
Female, age 64
Ovary sample 192
nTPM: 215.4
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 245.6
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 199.6
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 215.1
N/A
Female, age 16
Ovary sample 3663
nTPM: 388.1
N/A
Female, age 20
Ovary sample 3664
nTPM: 239.8
N/A
Female, age 32
Ovary sample 3665
nTPM: 188.3

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

275.5
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 275.5
Samples: 193

Max nTPM: 565.6
Min nTPM: 152.0
Std nTPM: 66.2
Median nTPM: 260.3
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 565.6
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 523.2
GTEX-15EOM-1526-SM-68723 20-29 years, female 481.1
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 469.5
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 444.2
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 431.0
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 428.3
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 426.0
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 425.4
GTEX-R55G-1526-SM-48FER 40-49 years, female 419.8
GTEX-14JG6-0626-SM-68716 30-39 years, female 412.3
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 393.1
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 392.7
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 380.3
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 376.7
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 372.2
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 371.6
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 370.4
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 367.5
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 366.6
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 358.8
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 357.9
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 351.9
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 351.4
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 348.9
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 342.8
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 339.8
GTEX-R45C-2526-SM-GRR28 60-69 years, female 336.4
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 335.9
GTEX-11I78-1926-SM-59878 50-59 years, female 335.0
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 331.1
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 329.2
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 327.6
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 327.4
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 327.4
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 327.2
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 324.6
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 322.7
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 321.7
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 318.0
GTEX-13SLX-2426-SM-664OM 50-59 years, female 316.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 316.1
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 314.0
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 313.5
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 312.8
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 309.7
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 305.7
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 305.0
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 303.0
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 299.9
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 299.5
GTEX-14PKV-1226-SM-6871T 20-29 years, female 299.4
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 298.7
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 297.8
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 296.0
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 295.7
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 295.4
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 291.5
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 288.8
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 288.3
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 288.2
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 287.3
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 286.6
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 286.1
GTEX-QCQG-1426-SM-48U22 50-59 years, female 285.0
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 284.5
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 284.4
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 284.0
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 282.7
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 282.6
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 281.5
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 281.2
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 279.7
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 278.8
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 276.2
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 276.1
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 275.3
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 275.1
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 274.8
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 274.4
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 272.8
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 272.3
GTEX-RU72-2226-SM-46MUE 50-59 years, female 272.0
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 271.3
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 271.1
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 271.0
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 268.7
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 268.3
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 268.0
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 265.3
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 265.2
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 265.1
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 264.4
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 264.3
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 264.3
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 261.2
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 260.3
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 259.9
GTEX-S341-0726-SM-4AD5R 40-49 years, female 259.6
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 259.2
GTEX-145ME-1226-SM-5MR87 40-49 years, female 258.5
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 257.8
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 257.7
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 257.2
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 256.8
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 256.6
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 256.6
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 255.9
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 254.4
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 254.3
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 252.2
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 252.0
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 251.9
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 250.7
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 249.9
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 249.8
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 249.6
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 249.0
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 248.3
GTEX-183WM-1926-SM-72D5F 70-79 years, female 245.6
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 245.5
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 245.2
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 244.7
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 244.2
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 244.2
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 240.4
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 240.3
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 240.3
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 239.7
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 239.4
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 239.3
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 238.4
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 237.9
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 237.7
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 237.7
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 237.3
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 237.2
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 235.5
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 234.8
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 234.7
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 233.2
GTEX-QVJO-3126-SM-COH22 60-69 years, female 232.6
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 231.6
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 230.8
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 230.6
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 230.1
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 229.3
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 228.4
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 226.2
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 225.7
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 224.3
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 224.2
GTEX-S32W-1226-SM-4AD67 50-59 years, female 224.0
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 223.7
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 222.8
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 222.5
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 220.6
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 220.0
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 219.0
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 217.2
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 216.0
GTEX-P78B-1926-SM-3P616 40-49 years, female 215.7
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 215.4
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 215.0
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 214.4
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 213.6
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 212.6
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 211.7
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 211.2
GTEX-14BIN-1426-SM-664NI 50-59 years, female 211.1
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 209.9
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 209.6
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 209.6
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 209.1
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 208.3
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 208.3
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 206.9
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 206.8
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 206.1
GTEX-18D9A-0826-SM-718C1 30-39 years, female 205.5
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 205.0
GTEX-Q734-0726-SM-48TZP 40-49 years, female 202.7
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 202.0
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 195.5
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 194.5
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 192.9
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 192.7
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 188.1
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 185.6
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 183.5
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 182.9
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 163.1
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 152.0
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

66.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 66.3
FF:10020-101D2 47,75,84 years, female 66.3

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