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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
76.0
nTPM
HPA Brain:
218.4
nTPM
GTEx:
76.0
nTPM
FANTOM5:
270.8
Scaled Tags Per Million
Pig:
151.8
nTPM
Mouse:
34.1
nTPM
Allen mouse:
2.2
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
218.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 175.6
1833
Male, age 53, unknown
201.3
1830
Male, age 51, unknown
197.4
2586
Male, age 75, left hemisphere
193.7
2666
Male, age 74, left hemisphere
191.4
2411
Female, age 72, unknown
185.1
1870
Female, age 42, unknown
179.1
2019
Male, age 18, unknown
176.9
2828
Female, age 72, unknown
156.8
1827
Male, age 72, unknown
138.0
2219
Male, age 76, both hemispheres
136.5
Dorsal raphe nucleus nTPM: 164.5
2750
Male, age 76, both hemispheres
192.2
2016
Female, age 72, unknown
179.3
2047
Male, age 72, unknown
157.9
1828
Male, age 53, unknown
155.9
2298
Female, age 72, unknown
137.1
Inferior colliculus nTPM: 150.2
2849
Male, age 72, unknown
163.6
1890
Male, age 53, unknown
153.1
1848
Female, age 42, unknown
149.2
2097
Female, age 72, unknown
134.9
Median raphe nucleus nTPM: 143.1
2220
Male, age 76, midline
143.1
Periaquaductal grey, anterior nTPM: 134.2
2502
Female, age 75, unknown
155.4
1947
Male, age 18, unknown
131.7
1795
Male, age 51, unknown
115.5
Periaquaductal grey, dorsal nTPM: 133.4
2464
Female, age 72, unknown
155.4
1840
Male, age 53, unknown
136.9
2850
Male, age 76, both hemispheres
121.2
1831
Male, age 72, unknown
120.3
Periaquaductal grey, lateral nTPM: 126.9
2053
Male, age 18, unknown
139.8
2272
Male, age 74, both hemispheres
123.3
2140
Male, age 76, both hemispheres
117.6
Pretectal area nTPM: 129.9
1815
Male, age 53, unknown
153.9
2825
Male, age 18, unknown
147.5
2316
Male, age 76, right hemisphere
146.9
2407
Male, age 75, both hemispheres
145.4
1817
Female, age 42, unknown
136.7
2224
Female, age 72, unknown
125.6
2007
Male, age 72, unknown
121.6
2667
Female, age 75, unknown
116.7
2273
Male, age 74, both hemispheres
116.6
1944
Female, age 72, unknown
114.1
1816
Male, age 51, unknown
104.3
Red nucleus nTPM: 218.4
1865
Male, age 51, unknown
254.1
1904
Male, age 53, unknown
247.7
2823
Male, age 76, right hemisphere
236.2
1821
Female, age 72, unknown
235.2
2227
Male, age 72, unknown
230.5
2503
Female, age 72, unknown
225.1
2769
Male, age 72, unknown
222.2
1954
Female, age 42, unknown
215.4
2588
Male, age 74, left hemisphere
201.0
2785
Male, age 18, unknown
193.2
2725
Female, age 75, unknown
186.5
2584
Male, age 75, left hemisphere
173.9
Substantia nigra nTPM: 168.6
2699
Male, age 18, unknown
186.3
2409
Female, age 72, unknown
181.9
2241
Male, age 72, unknown
179.9
1851
Male, age 51, unknown
178.0
2583
Male, age 75, right hemisphere
173.9
2590
Female, age 75, unknown
172.9
2665
Male, age 74, both hemispheres
168.6
1916
Female, age 42, unknown
162.3
1889
Female, age 72, unknown
147.6
1941
Male, age 53, unknown
134.3
Superior colliculus nTPM: 153.5
1995
Male, age 72, unknown
182.1
1913
Female, age 42, unknown
177.6
1895
Male, age 76, right hemisphere
170.3
2587
Male, age 74, left hemisphere
169.9
2668
Female, age 75, unknown
162.5
1839
Male, age 51, unknown
160.1
2664
Male, age 75, both hemispheres
142.9
1796
Male, age 53, unknown
135.5
2261
Male, age 18, unknown
121.0
2087
Female, age 72, unknown
113.5
Ventral tegmental area nTPM: 161.4
2223
Female, age 72, unknown
197.0
2410
Female, age 72, unknown
174.9
1915
Female, age 42, unknown
153.8
1942
Male, age 51, unknown
153.7
2218
Male, age 76, both hemispheres
147.5
2021
Male, age 53, unknown
141.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
76.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 76.0
Samples: 139
Max nTPM: 131.5
Min nTPM: 24.2
Std nTPM: 24.3
Median nTPM: 72.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
131.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
129.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
128.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
126.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
125.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
125.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
124.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
124.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
119.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
116.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
116.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
114.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
113.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
110.4
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
109.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
109.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
109.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
106.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
105.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
104.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
104.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
102.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
102.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
102.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
100.9
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
100.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
99.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
99.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
99.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
98.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
95.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
95.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
95.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
95.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
94.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
94.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
92.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
92.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
91.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
91.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
90.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
89.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
87.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
85.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
85.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
85.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
84.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
83.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
83.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
83.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
81.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
80.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
79.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
79.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
79.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
78.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
77.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
77.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
77.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
77.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
76.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
76.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
75.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
74.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
73.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
73.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
73.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
73.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
73.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
72.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
72.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
72.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
70.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
70.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
70.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
69.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
69.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
68.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
67.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
67.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
67.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
66.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
66.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
66.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
65.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
65.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
65.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
64.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
63.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
62.8
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
62.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
62.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
62.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
62.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
62.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
62.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
61.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
61.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
61.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
60.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
60.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
60.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
59.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
59.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
58.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
58.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
55.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
54.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
54.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
54.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
54.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
53.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
53.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
53.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
53.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
53.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
53.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
52.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
51.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
51.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
50.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
50.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
48.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
48.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
47.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
47.6
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
46.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
45.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
44.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
43.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
42.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
42.5
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
40.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
38.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
37.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
33.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
32.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
29.5
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
24.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
34.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 34.1
Samples: 4
Max nTPM: 36.8
Min nTPM: 31.0
Sample A
Male
31.0
Sample B
Male
33.6
Sample C
Female
36.8
Sample D
Female
35.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.