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SEZ6
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  • TISSUE

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  • SEZ6
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:94.8 nTPM
GTEx:61.5 nTPM
FANTOM5:456.3 Scaled Tags Per Million
Pig:59.5 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.8
Sample id Sample description nTPM
Putamen
nTPM: 94.8
1838 Male, age 80, right hemisphere 120.5
1937 Female, age 91, right hemisphere 106.5
1829 Male, age 74, unknown 101.1
2489 Female, age 72, unknown 98.2
2647 Male, age 75, left hemisphere 89.8
2466 Female, age 79, unknown 86.7
2482 Female, age 94, left hemisphere 60.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 61.5
Samples: 254

Max nTPM: 172.6
Min nTPM: 3.8
Std nTPM: 35.1
Median nTPM: 61.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 172.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 149.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 140.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 138.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 134.3
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 132.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 131.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 124.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 123.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 121.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 119.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 119.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 118.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 117.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 115.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 115.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 115.3
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 113.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 112.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 112.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 110.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 110.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 109.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 108.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 107.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 107.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 106.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 105.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 104.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 103.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 103.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 103.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 102.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 101.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 100.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 100.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 99.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 98.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 98.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 98.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 97.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 97.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 96.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 95.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 94.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 94.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 94.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 94.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 93.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 93.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 93.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 93.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 93.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 92.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 92.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 91.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 91.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 90.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 90.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 89.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 89.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 89.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 88.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 88.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 88.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 88.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 88.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 88.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 87.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 87.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 87.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 86.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 86.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 85.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 85.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 82.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 82.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 82.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 81.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 81.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 81.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 81.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 80.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 80.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 79.5
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 79.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 79.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 79.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 78.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 78.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 78.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 78.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 78.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 77.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 77.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 76.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 76.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 76.3
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 75.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 75.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 74.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 73.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 73.4
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 72.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 72.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 72.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 71.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 71.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 70.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 70.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 69.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 69.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 67.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 67.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 66.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 66.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 66.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 65.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 65.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 64.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 64.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 63.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 62.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 62.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 61.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 61.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 61.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 60.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 60.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 60.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 60.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 59.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 59.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 59.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 59.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 59.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 58.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 58.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 57.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 56.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 56.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 55.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 55.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 55.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 54.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 54.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 52.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 52.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 51.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 51.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 50.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 50.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 50.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 48.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 48.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 48.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 48.5
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 47.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 46.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 45.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 44.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 43.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 43.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 43.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 42.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 42.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 41.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 41.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 41.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 41.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 40.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 40.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 39.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 39.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 39.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 37.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 37.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 37.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 37.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 37.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 36.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 33.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 33.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 33.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 33.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 33.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 32.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 32.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 31.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 31.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 30.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 30.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 29.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 27.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 27.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 26.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 25.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 25.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 25.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 24.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 24.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 24.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 24.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 23.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 23.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 23.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 23.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 23.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 23.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 23.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 23.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 22.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 22.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 22.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 21.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 21.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 20.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 20.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 19.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 18.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 17.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 17.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 17.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 16.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 15.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 15.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 14.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 14.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 14.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 14.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 13.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 13.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 13.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 13.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 11.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 11.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 11.1
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 10.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 10.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 10.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 10.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 9.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 9.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 9.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 8.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 8.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 7.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 7.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 7.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 6.1
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 5.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 4.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 4.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 3.8
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

456.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 456.3
FF:10176-103C5 60 years, female 456.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.5
Pig sample Sample description nTPM
Putamen
nTPM: 59.5
Samples: 4

Max nTPM: 80.8
Min nTPM: 24.7
Sample A Female 24.7
Sample B Female 52.6
Sample C Male 80.8
Sample D Male 80.0

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