COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
Peripheral nerve/ganglion: Medium
RNA expressioni
Consensus:54.7 nTPM
HPA:43.5 nTPM
GTEx:54.7 nTPM
FANTOM5:131.5 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION

COLON - Antibody stainingi
Antibody HPA020449
Endothelial cells Low
Glandular cells High
Peripheral nerve/ganglion Medium



COLON - HPA RNA-seqi
Average nTPMi 43.5
overview
Male, age 54
Colon sample 67
nTPM: 44
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 37.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 42.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 42.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 29.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 53
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 46.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 45.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 45.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 52.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 43.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 44.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 37.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 54.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 54.7
Samples: 419

Max nTPM: 141.0
Min nTPM: 21.5
Std nTPM: 16.9
Median nTPM: 53.5
GTEX-1H3VY-2526-SM-9KNW1 50-59 years, male 141.0
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 129.1
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 105.8
GTEX-15RIE-2026-SM-7KFRW 60-69 years, male 98.9
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 93.9
GTEX-1KXAM-1926-SM-D3LAG 60-69 years, male 91.9
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 91.7
GTEX-14E1K-1626-SM-664MO 50-59 years, male 91.3
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 90.5
GTEX-14PK6-1826-SM-69LOM 70-79 years, female 89.9
GTEX-1B8KE-1526-SM-7DUG2 50-59 years, male 88.6
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Colon - Transverse
Average nTPM: 38.2
Samples: 479

Max nTPM: 88.7
Min nTPM: 15.9
Std nTPM: 13.3
Median nTPM: 34.7
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 88.7
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 87.3
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 83.4
GTEX-17F96-2026-SM-79ON4 70-79 years, male 80.4
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 79.8
GTEX-14C5O-2526-SM-5P9I5 60-69 years, male 77.4
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 76.7
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 76.1
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 76.0
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 73.0
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 72.7
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 131.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 131.5
FF:10014-101C5 62,83,84 years, mixed 131.5

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