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THOC3
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  • TISSUE

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  • THOC3
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:38.3 nTPM
GTEx:18.1 nTPM
Pig:13.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.3
Sample id Sample description nTPM
Putamen
nTPM: 38.3
2466 Female, age 79, unknown 50.6
1829 Male, age 74, unknown 45.6
1838 Male, age 80, right hemisphere 43.3
1937 Female, age 91, right hemisphere 41.1
2647 Male, age 75, left hemisphere 30.8
2489 Female, age 72, unknown 30.2
2482 Female, age 94, left hemisphere 26.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 18.1
Samples: 254

Max nTPM: 64.4
Min nTPM: 4.0
Std nTPM: 10.9
Median nTPM: 15.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 64.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 58.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 49.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 48.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 45.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 45.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 45.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 44.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 43.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 43.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 43.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 42.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 41.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 39.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 38.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 37.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 36.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 36.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 36.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 34.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 34.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 33.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 33.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 33.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 33.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 32.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 32.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 32.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 31.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 31.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 31.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 30.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 30.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 30.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 30.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 29.7
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 29.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 29.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 29.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 29.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 28.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 28.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 28.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 28.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 28.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 28.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 28.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 28.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 27.9
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 27.9
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 27.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 27.1
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 26.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 26.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 26.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 26.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 26.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 26.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 26.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 25.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 25.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 25.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 24.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 24.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 23.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 23.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 23.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 23.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 23.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 23.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 22.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 22.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 22.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 22.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 22.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 22.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 22.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 22.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 21.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 21.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 21.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 21.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 21.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 21.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 20.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 20.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 20.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 20.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 20.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 20.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 20.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 20.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 20.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 20.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 19.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 19.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 19.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 19.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 19.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 19.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 19.2
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 19.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 19.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 19.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 19.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 18.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 18.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 18.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 18.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 18.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 18.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 17.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 17.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 17.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 17.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 17.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 17.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 17.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 17.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 17.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 16.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 16.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 16.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 15.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 15.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 15.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 15.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 15.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 14.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 14.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 14.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 14.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 14.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 14.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 14.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 14.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 14.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 13.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 13.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 13.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 13.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 13.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 13.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 12.9
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 12.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 12.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 12.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 12.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 12.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 12.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 12.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 12.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 12.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 12.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 12.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 12.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 11.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 11.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 11.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 11.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 11.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 11.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 11.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 11.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 11.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 11.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 11.1
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 11.0
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 10.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 10.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 10.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 10.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 10.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 10.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 10.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 10.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 10.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 10.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 10.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 10.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 9.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 9.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 9.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 9.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 9.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 9.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 9.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 9.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 9.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 9.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 9.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 9.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 9.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 9.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 9.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 9.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 9.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 9.0
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 8.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 8.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 8.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 8.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 8.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 8.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 8.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 8.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 8.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 8.5
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 8.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 8.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 8.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 8.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 8.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 7.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 7.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 7.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 7.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 7.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 7.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 7.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 7.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 7.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 7.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 6.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 6.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 6.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 6.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 6.6
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 6.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 6.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 6.4
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 6.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 6.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 6.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 6.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 6.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 6.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 6.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 6.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 6.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 6.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 5.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 5.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 5.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 5.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 5.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 5.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 5.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 5.2
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 4.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 4.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 4.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 4.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 4.0
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PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.3
Pig sample Sample description nTPM
Putamen
nTPM: 13.3
Samples: 4

Max nTPM: 16.8
Min nTPM: 11.0
Sample A Female 13.3
Sample B Female 11.0
Sample C Male 16.8
Sample D Male 12.2

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