HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:61.4 nTPM
HPA Brain:91.8 nTPM
GTEx:61.4 nTPM
FANTOM5:41.4 Scaled Tags Per Million
Pig:151.0 nTPM
Mouse:133.2 nTPM
Allen mouse:21.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 91.8
Sample id Sample description nTPM
Hippocampus
nTPM: 72.2
1898 Male, age 80, left hemisphere 84.0
2621 Female, age 67, right hemisphere 75.7
2529 Female, age 94, left hemisphere 74.9
1911 Female, age 85, right hemisphere 70.4
2148 Female, age 91, left hemisphere 67.3
1855 Male, age 76, left hemisphere 60.6
Dentate gyrus
nTPM: 67.0
2531 Female, age 67, both hemispheres 83.5
2246 Female, age 85, both hemispheres 73.1
1927 Female, age 91, both hemispheres 66.9
2528 Male, age 74, both hemispheres 66.1
2530 Female, age 94, left hemisphere 60.9
2010 Male, age 76, both hemispheres 51.3
Entorhinal gyrus
nTPM: 80.2
2613 Female, age 94, left hemisphere 95.2
1787 Male, age 76, left hemisphere 93.0
2764 Male, age 80, right hemisphere 84.3
1938 Female, age 85, left hemisphere 77.8
2117 Female, age 91, right hemisphere 68.6
2686 Male, age 75, right hemisphere 62.5
Hippocampus, CA1
nTPM: 84.5
2749 Male, age 80, left hemisphere 137.3
2527 Male, age 74, both hemispheres 93.5
2082 Female, age 91, right hemisphere 76.8
1873 Female, age 85, both hemispheres 60.7
2045 Male, age 76, both hemispheres 54.0
Hippocampus, CA2
nTPM: 71.8
1892 Male, age 76, both hemispheres 85.0
2249 Male, age 74, both hemispheres 75.4
2113 Female, age 91, right hemisphere 72.6
2437 Female, age 94, left hemisphere 70.7
1940 Female, age 85, left hemisphere 68.8
1963 Male, age 80, left hemisphere 58.2
Hippocampus, CA3
nTPM: 91.8
2137 Male, age 80, left hemisphere 150.5
2861 Female, age 67, both hemispheres 96.9
2620 Female, age 94, left hemisphere 88.3
1867 Male, age 76, both hemispheres 84.2
2436 Male, age 74, both hemispheres 71.2
1891 Female, age 85, both hemispheres 59.6
Parahippocampal cortex
nTPM: 79.7
2245 Female, age 91, both hemispheres 109.6
2622 Female, age 67, right hemisphere 86.9
2250 Female, age 67, right hemisphere 84.7
2693 Female, age 94, both hemispheres 84.0
2692 Male, age 74, both hemispheres 75.5
1933 Female, age 85, both hemispheres 74.2
2018 Male, age 76, both hemispheres 72.4
2532 Female, age 72, left hemisphere 71.3
1990 Female, age 91, right hemisphere 70.6
1850 Male, age 80, both hemispheres 67.5
Perirhinal gyrus
nTPM: 91.6
1794 Male, age 80, right hemisphere 108.4
1847 Female, age 91, left hemisphere 99.7
2521 Female, age 94, right hemisphere 88.0
1841 Female, age 85, right hemisphere 83.0
2848 Male, age 76, right hemisphere 78.9
Subiculum
nTPM: 76.8
1901 Male, age 80, both hemispheres 94.5
2619 Male, age 74, both hemispheres 83.1
1977 Female, age 85, both hemispheres 81.7
2438 Female, age 94, left hemisphere 79.7
2729 Female, age 91, right hemisphere 65.7
2042 Male, age 76, both hemispheres 56.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 61.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.4
Samples: 255

Max nTPM: 209.4
Min nTPM: 9.6
Std nTPM: 35.9
Median nTPM: 54.0
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 209.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 189.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 189.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 184.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 175.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 175.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 159.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 158.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 156.6
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 148.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 138.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 41.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.4
FF:10169-103B7 60 years, female 51.9
FF:10153-102I9 76 years, female 31.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 151.0
Pig sample Sample description nTPM
Subiculum
nTPM: 137.0
Samples: 4

Max nTPM: 175.4
Min nTPM: 113.5
Sample A Female 175.4
Sample B Female 122.9
Sample C Male 136.2
Sample D Male 113.5
Dorsal hippocampus
nTPM: 142.2
Samples: 4

Max nTPM: 168.7
Min nTPM: 111.9
Sample A Female 168.7
Sample B Female 163.0
Sample C Male 111.9
Sample D Male 125.1
Entorhinal cortex
nTPM: 151.0
Samples: 4

Max nTPM: 167.6
Min nTPM: 128.3
Sample A Female 166.9
Sample B Female 141.1
Sample C Male 167.6
Sample D Male 128.3
Ventral hippocampus
nTPM: 130.4
Samples: 4

Max nTPM: 201.7
Min nTPM: 89.0
Sample A Female 89.0
Sample B Female 95.5
Sample C Male 135.5
Sample D Male 201.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 133.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 133.2
Samples: 4

Max nTPM: 151.5
Min nTPM: 119.6
Sample A Male 119.8
Sample B Male 141.8
Sample C Female 119.6
Sample D Female 151.5
Hippocampal formation
nTPM: 87.7
Samples: 4

Max nTPM: 98.4
Min nTPM: 73.7
Sample A Male 98.4
Sample B Male 83.7
Sample C Female 73.7
Sample D Female 94.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 21.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.4
532667 Antisense, RP_040825_01_C02, Mouse strain C57BL/6J (56 days, male) 24.4
70613977 Antisense, RP_050725_01_C08, Mouse strain C57BL/6J (56 days, male) 18.4

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