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CNTN1
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  • SUMMARY

  • TISSUE

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  • SINGLE CELL

  • SUBCELL

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  • BLOOD

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  • STRUCTURE

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  • CNTN1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

226.241
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:43.2 nTPM
HPA Brain:200.4 nTPM
GTEx:43.2 nTPM
Pig:239.6 nTPM
Mouse:202.0 nTPM
Allen mouse:1.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA070467
Hypothalamus mean intensity 226.241
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 97.773
Mammillary nucleus 16.276
Periventricular hypothalamic nucleus 189.344
Supraoptic nucleus 148.255
Tuberal nucleus 104.459
Ventral tuberomammillary nucleus 25.664
Lateral preoptic area 12.550
Medial preoptic area 26.195
Suprachiasmatic nucleus 222.439
Paraventricular hypothalamic nucleus 46.027
Anterior hypothalamic area, central 94.175
Ventral medial hypothalamic nucleus 111.127
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 226.241
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 46.773
Dorsal medial hypothalamic nucleus 75.233
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

200.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 158.8
2226 Male, age 75, left hemisphere 164.0
1961 Female, age 42, unknown 153.6
Dorsomedial nucleus
nTPM: 179.9
1989 Male, age 62, unknown 219.0
2041 Female, age 72, unknown 176.4
2017 Female, age 42, unknown 144.4
Lateral hypothalamic area
nTPM: 133.0
1791 Male, age 80, right hemisphere 169.6
2271 Male, age 75, both hemispheres 124.1
2412 Male, age 62, unknown 121.1
2228 Male, age 66, unknown 117.3
Mammillary body
nTPM: 200.4
1923 Female, age 72, unknown 237.8
1945 Male, age 80, right hemisphere 222.9
1834 Female, age 42, unknown 212.2
1948 Female, age 72, unknown 164.8
2413 Male, age 66, unknown 164.6
Paraventricular nucleus
nTPM: 125.3
2700 Male, age 62, unknown 125.3
Preoptic area
nTPM: 152.4
1861 Female, age 42, unknown 164.4
1907 Male, age 80, right hemisphere 154.8
2414 Female, age 72, unknown 138.1
Supraoptic nucleus
nTPM: 133.4
2043 Male, age 62, unknown 152.2
1894 Female, age 72, unknown 124.8
2835 Female, age 72, unknown 123.2
Ventromedial nucleus
nTPM: 153.5
1982 Female, age 72, unknown 158.7
1822 Female, age 42, unknown 148.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 43.2
Samples: 257

Max nTPM: 88.1
Min nTPM: 7.5
Std nTPM: 14.2
Median nTPM: 42.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 88.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 87.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 85.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 84.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 83.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 80.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 77.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 75.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 73.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 71.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 71.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 70.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 70.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 68.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 67.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 66.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 66.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 65.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 63.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 62.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 61.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 60.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 60.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 60.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 60.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 60.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 59.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 59.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 59.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 59.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 59.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 58.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 58.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 58.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 57.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 57.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 57.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 57.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 56.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 56.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 56.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 55.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 55.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 55.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 55.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 54.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 54.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 54.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 54.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 54.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 53.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 53.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 52.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 52.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 52.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 52.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 52.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 52.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 52.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 52.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 51.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 51.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 51.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 51.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 51.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 51.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 50.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 50.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 50.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 50.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 50.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 50.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 50.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 50.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 50.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 50.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 49.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 49.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 49.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 49.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 49.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 48.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 48.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 48.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 48.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 48.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 48.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 48.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 47.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 47.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 47.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 46.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 46.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 46.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 46.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 45.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 45.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 45.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 45.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 45.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 45.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 45.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 45.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 44.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 44.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 44.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 44.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 44.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 44.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 44.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 44.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 43.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 43.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 43.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 43.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 43.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 43.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 42.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 42.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 42.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 42.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 42.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 42.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 42.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 42.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 42.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 42.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 42.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 42.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 42.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 42.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 41.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 41.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 41.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 41.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 41.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 41.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 41.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 41.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 40.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 40.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 40.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 40.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 40.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 40.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 40.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 40.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 40.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 40.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 40.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 39.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 39.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 39.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 39.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 39.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 39.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 39.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 39.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 39.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 39.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 39.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 38.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 38.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 38.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 38.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 37.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 37.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 37.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 37.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 37.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 37.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 37.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 36.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 36.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 36.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 36.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 36.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 36.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 35.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 35.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 35.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 35.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 35.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 34.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 34.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 34.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 34.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 34.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 34.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 33.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 33.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 33.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 33.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 33.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 33.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 33.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 33.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 33.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 32.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 32.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 32.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 32.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 32.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 32.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 32.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 32.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 31.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 31.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 31.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 31.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 31.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 31.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 31.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 30.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 30.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 30.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 30.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 30.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 30.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 30.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 29.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 29.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 29.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 29.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 28.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 28.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 28.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 28.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 27.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 27.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 27.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 27.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 26.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 26.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 26.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 25.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 25.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 25.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 25.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 24.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 22.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 22.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 21.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 20.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 20.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 20.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 19.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 19.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 19.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 18.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 15.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 13.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 13.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 12.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 10.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 10.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 7.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

239.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 239.6
Samples: 4

Max nTPM: 294.8
Min nTPM: 183.6
Sample A Female 290.1
Sample B Female 294.8
Sample C Male 189.9
Sample D Male 183.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

202.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 202.1
Samples: 4

Max nTPM: 210.1
Min nTPM: 193.0
Sample A Male 193.0
Sample B Male 209.1
Sample C Female 210.1
Sample D Female 196.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.4
416 Antisense, RP_Baylor_102695, Mouse strain C57BL/6J (56 days, male) 2.5
414 Antisense, RP_Baylor_102695, Mouse strain C57BL/6J (56 days, male) 2.2
74300879 Antisense, RP_051219_03_H12, Mouse strain C57BL/6J (56 days, male) 0.3

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