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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
195.8
nTPM
FANTOM5:
160.2
Scaled Tags Per Million
Pig:
68.7
nTPM
Allen mouse:
3.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
195.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 139.5
1984
Male, age 76, both hemispheres
162.2
2301
Female, age 85, both hemispheres
150.7
2188
Female, age 91, both hemispheres
128.5
2090
Male, age 80, both hemispheres
116.5
Dorsal cochlear nucleus nTPM: 142.1
2370
Male, age 61, both hemispheres
145.8
2378
Male, age 80, both hemispheres
142.9
2802
Male, age 74, right hemisphere
142.5
2187
Female, age 91, both hemispheres
141.2
2058
Male, age 76, both hemispheres
138.1
Dorsal tegmental nucleus nTPM: 166.9
2083
Male, age 80, both hemispheres
184.5
2358
Male, age 61, both hemispheres
175.0
1936
Male, age 76, left hemisphere
167.1
2326
Male, age 74, both hemispheres
140.9
Dorsolateral tegmental area nTPM: 168.0
2654
Male, age 80, both hemispheres
197.5
2337
Male, age 61, both hemispheres
185.3
2141
Male, age 76, both hemispheres
164.4
2360
Male, age 74, both hemispheres
154.6
2751
Female, age 85, both hemispheres
138.2
Kolliker-Fuse nucleus nTPM: 195.8
2315
Male, age 76, right hemisphere
291.8
2163
Male, age 80, both hemispheres
168.3
2793
Female, age 91, left hemisphere
127.4
Lateral lemniscal nuclei nTPM: 130.3
2746
Female, age 85, left hemisphere
149.3
2320
Female, age 91, left hemisphere
129.5
2169
Male, age 76, both hemispheres
126.1
2453
Male, age 74, right hemisphere
124.6
2036
Male, age 80, both hemispheres
122.2
Lateral parabrachial nucleus nTPM: 173.8
2792
Male, age 76, both hemispheres
196.3
2139
Female, age 85, right hemisphere
174.9
2013
Male, age 80, both hemispheres
164.8
2790
Male, age 61, both hemispheres
159.1
Lateral vestibular nucleus nTPM: 148.2
2184
Male, age 76, both hemispheres
155.0
2311
Male, age 80, both hemispheres
141.5
Locus coeruleus nTPM: 170.8
2317
Female, age 72, unknown
179.8
2788
Male, age 74, unknown
178.1
2014
Male, age 55, unknown
176.8
2123
Female, age 91, both hemispheres
175.1
1980
Male, age 76, both hemispheres
173.3
2162
Male, age 80, both hemispheres
164.5
2720
Male, age 74, both hemispheres
147.8
Medial parabrachial nucleus nTPM: 156.5
2156
Male, age 61, both hemispheres
171.8
2786
Male, age 76, both hemispheres
160.6
2463
Female, age 85, right hemisphere
152.5
2854
Male, age 80, both hemispheres
149.0
2170
Female, age 91, both hemispheres
148.6
Medial periolivary nuclei nTPM: 132.6
2791
Male, age 74, right hemisphere
152.2
2081
Male, age 80, both hemispheres
131.7
2171
Female, age 85, both hemispheres
129.6
2063
Male, age 76, both hemispheres
127.9
2458
Female, age 91, both hemispheres
121.5
Motor facial nucleus nTPM: 145.3
2795
Female, age 91, both hemispheres
197.5
2365
Male, age 74, right hemisphere
139.7
2126
Male, age 61, both hemispheres
139.0
2062
Male, age 76, both hemispheres
137.6
2697
Female, age 85, both hemispheres
136.3
2327
Male, age 80, both hemispheres
121.7
Motor trigeminal nucleus nTPM: 140.5
2335
Male, age 61, both hemispheres
155.2
2309
Male, age 76, both hemispheres
146.9
2560
Male, age 74, both hemispheres
140.5
2321
Female, age 91, both hemispheres
133.0
2079
Male, age 80, both hemispheres
126.8
Nuclei of the trapezoid body nTPM: 139.6
2368
Female, age 91, both hemispheres
154.4
1983
Male, age 76, both hemispheres
146.1
2166
Male, age 80, both hemispheres
139.2
2735
Female, age 85, both hemispheres
130.6
2159
Male, age 61, both hemispheres
127.6
Nucleus raphe magnus nTPM: 132.8
2328
Male, age 80, both hemispheres
148.3
2455
Male, age 74, both hemispheres
148.1
2051
Male, age 76, both hemispheres
143.6
2459
Female, age 91, both hemispheres
125.0
2160
Male, age 61, both hemispheres
119.5
2172
Female, age 85, both hemispheres
112.2
Paramedian reticular nucleus nTPM: 151.2
2052
Male, age 76, both hemispheres
171.9
2057
Male, age 80, both hemispheres
154.1
2313
Male, age 61, both hemispheres
145.8
2050
Female, age 85, both hemispheres
132.8
Pedunculopontine tegmental nucleus nTPM: 164.0
2334
Male, age 80, both hemispheres
172.6
2338
Male, age 61, both hemispheres
161.9
1921
Female, age 85, both hemispheres
157.3
Pontine nuclei nTPM: 134.3
1863
Male, age 55, unknown
154.2
2115
Male, age 80, left hemisphere
145.5
2109
Female, age 72, unknown
140.0
2787
Female, age 85, both hemispheres
134.5
1968
Male, age 76, left hemisphere
133.8
2454
Male, age 74, left hemisphere
129.5
2319
Female, age 91, both hemispheres
118.3
2727
Male, age 61, right hemisphere
118.3
Pontine raphe nucleus nTPM: 150.1
2853
Male, age 76, midline
171.7
2122
Female, age 85, midline
128.5
Posteroventral cochlear nucleus nTPM: 137.3
2070
Male, age 76, both hemispheres
170.9
2371
Male, age 61, both hemispheres
154.2
2752
Female, age 85, both hemispheres
132.7
2341
Male, age 80, both hemispheres
119.2
2135
Female, age 91, both hemispheres
109.7
Principal sensory trigeminal nucleus nTPM: 139.9
2324
Male, age 76, both hemispheres
187.6
2158
Male, age 61, both hemispheres
134.9
2008
Male, age 80, left hemisphere
119.6
2367
Female, age 91, left hemisphere
117.6
Reticular pontine nucleus, caudal nTPM: 132.7
2092
Male, age 76, both hemispheres
155.3
2332
Male, age 80, right hemisphere
136.4
2559
Male, age 74, both hemispheres
126.9
2457
Female, age 91, both hemispheres
112.4
Reticular pontine nucleus, oral nTPM: 151.8
1939
Male, age 80, both hemispheres
196.5
2167
Male, age 76, both hemispheres
156.5
2361
Male, age 74, both hemispheres
135.9
2012
Female, age 85, both hemispheres
135.0
2366
Female, age 91, both hemispheres
134.9
Reticulotegmental nucleus nTPM: 144.0
2333
Male, age 80, both hemispheres
158.3
2322
Female, age 91, both hemispheres
146.1
2452
Male, age 74, both hemispheres
141.2
2325
Male, age 76, both hemispheres
130.6
Spinal trigeminal nucleus, oral nTPM: 151.4
1978
Male, age 76, both hemispheres
158.1
2737
Female, age 85, both hemispheres
152.2
2164
Male, age 80, both hemispheres
144.0
Subcoeruleus area nTPM: 149.0
2323
Female, age 91, left hemisphere
173.8
1958
Male, age 80, both hemispheres
148.1
2369
Female, age 85, left hemisphere
147.0
2451
Male, age 74, both hemispheres
139.2
2089
Male, age 76, left hemisphere
137.2
Superior olive nTPM: 139.7
2329
Male, age 80, right hemisphere
152.2
2364
Male, age 74, right hemisphere
146.8
2020
Male, age 76, both hemispheres
140.0
1875
Female, age 85, both hemispheres
131.9
2561
Female, age 91, both hemispheres
127.6
Ventral periolivary nuclei nTPM: 131.0
2165
Male, age 80, both hemispheres
144.2
2023
Male, age 76, both hemispheres
135.7
2130
Female, age 85, both hemispheres
135.7
2794
Female, age 91, left hemisphere
108.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 150.5
2359
Male, age 61, both hemispheres
183.6
2840
Female, age 85, both hemispheres
164.6
1959
Male, age 76, both hemispheres
149.1
2161
Male, age 80, both hemispheres
141.8
2456
Female, age 91, both hemispheres
139.4
2449
Male, age 74, both hemispheres
124.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
68.7
Pig sample
Sample description
nTPM
Pons nTPM: 68.7
Samples: 4
Max nTPM: 82.0
Min nTPM: 56.2
Sample A
Female
82.0
Sample B
Female
56.2
Sample C
Male
64.7
Sample D
Male
71.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.